RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683902" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13419318 13419318 PRJNA683902_S_NODE_33571_length_166_cov_1.806202_g33127_i0 PRJNA683902 33571 166 1.806202 2.99829532 uncultured Chlamydiales bacterium 174324 Bacteria Bacteria 176 7.91e-40   NTclustered gi|880804273|gb|KT263017.1| 174324 g33127 i0 85.799 84.6265060240964 169 21 100 3 1 166 34 202 Uncultured Chlamydiales bacterium clone SW116D 16S ribosomal RNA gene, partial sequence blastn 14048 176 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     uncultured Chlamydiales bacterium
15968038 15968038 PRJNA683902_S_NODE_31253_length_174_cov_1.576642_g30809_i0 PRJNA683902 31253 174 1.576642 2.74335708 uncultured Chlamydiae bacterium 305355 Bacteria Bacteria 239 1.05e-58   NTclustered gi|2874254045|emb|OY970369.1| 305355 g30809 i0 91.379 104.471264367816 174 15 100 0 1 174 175197 175024 MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 blastn 18178 239 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       uncultured Chlamydiae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;