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contig_metadata

23 rows where bioproject = "PRJNA683902", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 23 ✖

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA683902 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4493223 4493223 PRJNA683902_S_NODE_24884_length_203_cov_4.903614_g24440_i0 PRJNA683902 24884 203 4.903614 9.95433642 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 348 2.0100000000000006e-91   NTclustered gi|2874253760|emb|OY969701.1| 2283092 g24440 i0 97.537 157.871921182266 203 5 100 0 1 203 3174662 3174460 MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 blastn 32048 348 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
9593855 9593855 PRJNA683902_S_NODE_19308_length_245_cov_3.326923_g18864_i0 PRJNA683902 19308 245 3.326923 8.15096135 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 180 9.72e-41   NTclustered gi|2874253950|emb|OY970275.1| 171953 g18864 i0 81.013 83.9387755102041 237 36 94 8 5 235 4267666 4267433 MAG: uncultured Acidobacteriota bacterium isolate MFD03399.bin.c.2 genome assembly, chromosome: 1 blastn 20565 180 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
12144732 12144732 PRJNA683902_S_NODE_34650_length_163_cov_1.507937_g34206_i0 PRJNA683902 34650 163 1.507937 2.45793731 Acidobacteriota bacterium 1978231 Bacteria Bacteria 252 1.25e-62   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g34206 i0 94.479 80.840490797546 163 9 100 0 1 163 4652136 4652298 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 13177 252 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
12144747 12144747 PRJNA683902_S_NODE_36290_length_158_cov_4.074380_g35846_i0 PRJNA683902 36290 158 4.07438 6.4375204 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 265 1.5399999999999998e-66   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g35846 i0 96.835 1 158 5 100 0 1 158 635213 635056 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 158 265 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
12144772 12144772 PRJNA683902_S_NODE_39410_length_151_cov_2.570175_g38966_i0 PRJNA683902 39410 151 2.570175 3.88096425 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 200 4.16e-47   NTclustered gi|2874253760|emb|OY969701.1| 2283092 g38966 i0 90.667 373.05298013245 150 14 99 0 2 151 3177076 3176927 MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 blastn 56331 200 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
15968012 15968012 PRJNA683902_S_NODE_27233_length_191_cov_1.214286_g26789_i0 PRJNA683902 27233 191 1.214286 2.31928626 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 276 8.95e-70   NTclustered gi|76574293|gb|DQ139441.1| 171953 g26789 i0 92.67 104.895287958115 191 14 100 0 1 191 607 797 Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence blastn 20035 276 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
15968032 15968032 PRJNA683902_S_NODE_30573_length_176_cov_2.273381_g30129_i0 PRJNA683902 30573 176 2.273381 4.00115056 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 100 5.23e-17   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g30129 i0 91.667 0.409090909090909 72 6 41 0 1 72 1676956 1677027 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 72 100 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
17243102 17243102 PRJNA683902_S_NODE_13074_length_348_cov_3.318328_g12630_i0 PRJNA683902 13074 348 3.318328 11.54778144 Granulicella sp. 5B5 1617967 Bacteria Bacteria 555 2.0599999999999994e-153   NTclustered gi|1886125103|gb|CP046444.1| 1617967 g12630 i0 95.402 105.433908045977 348 16 100 0 1 348 2652411 2652758 Granulicella sp. 5B5 chromosome, complete genome blastn 36691 555 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella sp. 5B5
17243114 17243114 PRJNA683902_S_NODE_14034_length_326_cov_4.709343_g13590_i0 PRJNA683902 14034 326 4.709343 15.35245818 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 484 2.5499999999999994e-132   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g13590 i0 93.846 308.193251533742 325 15 98 4 1 321 634315 634638 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 100471 484 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
17243267 17243267 PRJNA683902_S_NODE_30254_length_177_cov_3.885714_g29810_i0 PRJNA683902 30254 177 3.885714 6.87771378 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 250 4.94e-62   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g29810 i0 94.444 88.316384180791 162 9 92 0 1 162 634902 635063 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 15632 250 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
18517448 18517448 PRJNA683902_S_NODE_32995_length_168_cov_1.511450_g32551_i0 PRJNA683902 32995 168 1.51145 2.539236 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 215 1.7e-51   NTclustered gi|2874254057|emb|OY970381.1| 194844 g32551 i0 90 168.904761904762 170 12 100 5 1 168 1657105 1657271 MAG: uncultured Acidobacteriaceae bacterium isolate MFD04580.bin.1.19 genome assembly, chromosome: 1 blastn 28376 215 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
19026860 19026860 PRJNA683902_S_NODE_14375_length_318_cov_27.366548_g13931_i0 PRJNA683902 14375 318 27.366548 87.02562264 Chloracidobacterium 458032 Bacteria Bacteria 460 4.1799999999999997e-125   NTclustered gi|2874253692|emb|OY969418.1| 171953 g13931 i0 93.016 191.12893081761 315 22 99 0 1 315 4231695 4231381 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 60779 460 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
20302247 20302247 PRJNA683902_S_NODE_6956_length_685_cov_4.013889_g6583_i0 PRJNA683902 6956 685 4.013889 27.49513965 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 750 0   NTclustered gi|2874253885|emb|OY970060.1| 171953 g6583 i0 86.963 91.8262773722628 698 54 99 25 2 685 4840815 4840141 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 62901 756 0.992063492063492 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
21067724 21067724 PRJNA683902_S_NODE_23057_length_214_cov_7.305085_g22613_i0 PRJNA683902 23057 214 7.305085 15.6328819 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 307 3.6400000000000006e-79   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g22613 i0 92.558 187.696261682243 215 14 100 2 1 214 635884 636097 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 40167 307 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
22342763 22342763 PRJNA683902_S_NODE_8718_length_536_cov_4.278557_g8295_i0 PRJNA683902 8718 536 4.278557 22.93306552 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 721 0   NTclustered gi|2874253760|emb|OY969701.1| 2283092 g8295 i0 91.061 101.839552238806 537 42 100 5 1 536 3176628 3176097 MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 blastn 54586 721 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
24891481 24891481 PRJNA683902_S_NODE_35980_length_159_cov_2.213115_g35536_i0 PRJNA683902 35980 159 2.213115 3.51885285 uncultured Granulicella sp. 1241325 Bacteria Bacteria 115 1.66e-21   NTclustered gi|2626255659|emb|OY843766.1| 1241325 g35536 i0 84.483 34.3584905660377 116 18 73 0 44 159 2043214 2043329 MAG: uncultured Granulicella sp. isolate e6d70442-04f8-4699-a368-e2225de37168 genome assembly, chromosome: 1 blastn 5463 115 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella uncultured Granulicella sp.
25401981 25401981 PRJNA683902_S_NODE_27600_length_189_cov_1.532895_g27156_i0 PRJNA683902 27600 189 1.532895 2.89717155 Pseudomonadati 3379134 Bacteria Bacteria 95.3 2.66e-15   NTclustered gi|94549081|gb|CP000360.1| 204669 g27156 i0 90.278 46.7301587301587 72 7 38 0 18 89 1550070 1550141 Candidatus Koribacter versatilis Ellin345, complete genome blastn 8832 95.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Korobacter Candidatus Korobacter versatilis
27335212 27335212 PRJNA683902_S_NODE_31423_length_173_cov_2.860294_g30979_i0 PRJNA683902 31423 173 2.860294 4.94830862 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 48.5 1.32e-4   NR MDX1998535.1 2651171 g30979 i0 52.9 2.65317919075145 51 24 88.4 0 19 171 477 527 MDX1998535.1 tetratricopeptide repeat protein [Thermoanaerobaculia bacterium] diamond 459 48.5 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27714414 27714414 PRJNA683902_S_NODE_36744_length_157_cov_3.575000_g36300_i0 PRJNA683902 36744 157 3.575 5.61275 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 49.3 5.7e-5   NR HEY2819906.1 3069120 g36300 i0 51.1 1.91082802547771 47 21 89.8 1 1 141 95 139 HEY2819906.1 winged helix-turn-helix domain-containing protein [Candidatus Acidiferrum sp.] diamond 300 49.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
31536144 31536144 PRJNA683902_S_NODE_29276_length_181_cov_2.250000_g28832_i0 PRJNA683902 29276 181 2.25 4.0725 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.2 5e-11   NR UCF68959.1 1978231 g28832 i0 54.2 1.87292817679558 59 27 97.8 0 3 179 29 87 UCF68959.1 MAG: hypothetical protein JSV80_06650, partial [Acidobacteriota bacterium] diamond 339 63.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31599354 31599354 PRJNA683902_S_NODE_34316_length_164_cov_1.228346_g33872_i0 PRJNA683902 34316 164 1.228346 2.01448744 Acidobacteriota bacterium 1978231 Bacteria Bacteria 69.3 5.36e-12   NR MDJ0838682.1 1978231 g33872 i0 61.5 1.75609756097561 52 19 95.1 1 6 161 164 214 MDJ0838682.1 AAA family ATPase [Acidobacteriota bacterium] diamond 288 69.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32358764 32358764 PRJNA683902_S_NODE_27319_length_190_cov_2.594771_g26875_i0 PRJNA683902 27319 190 2.594771 4.9300649 Terriglobia bacterium 2081523 Bacteria Bacteria 41.6 0.046   NR MBZ5660623.1 2081523 g26875 i0 43.8 0.757894736842105 48 23 69.5 1 161 30 22 69 MBZ5660623.1 hypothetical protein [Terriglobia bacterium] diamond 144 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
32611409 32611409 PRJNA683902_S_NODE_38460_length_153_cov_2.577586_g38016_i0 PRJNA683902 38460 153 2.577586 3.94370658 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 71.2 9.85e-13   NR HEX7152041.1 2651171 g38016 i0 69.6 1.76470588235294 46 14 90.2 0 144 7 2666 2711 HEX7152041.1 PKD domain-containing protein [Thermoanaerobaculia bacterium] diamond 270 71.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;