RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA683902" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 23 ✖

bioproject 1

  • PRJNA683902 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
665337 665337 PRJNA683902_S_NODE_30901_length_175_cov_1.942029_g30457_i0 PRJNA683902 30901 175 1.942029 3.39855075 Gnomoniopsis castaneae mitovirus 1 3115468 Viruses Viruses 100 5.19e-17   NTclustered gi|2654366799|gb|PP133326.1| 3115468 g30457 i0 85.417 0.548571428571429 96 14 55 0 80 175 1744 1649 Gnomoniopsis castaneae mitovirus 1 RdRp gene, complete cds blastn 96 100 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Gnomoniopsis castaneae mitovirus 1
1941300 1941300 PRJNA683902_S_NODE_28842_length_183_cov_2.054795_g28398_i0 PRJNA683902 28842 183 2.054795 3.76027485 Narnaviridae sp. 2583949 Viruses Viruses 106 2.47e-25   NR URG17005.1 2583949 g28398 i0 85.2 1 61 9 100 0 183 1 308 368 URG17005.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 183 106 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
1941325 1941325 PRJNA683902_S_NODE_322_length_4645_cov_374.651476_g304_i0 PRJNA683902 322 4645 374.651476 17402.5610602 Totivirus ni 3432954 Viruses Viruses 8357 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g304 i0 99.35 3.92960172228202 4616 28 99 2 9 4623 4615 1 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 18253 8357 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
3216157 3216157 PRJNA683902_S_NODE_25363_length_201_cov_1.189024_g24919_i0 PRJNA683902 25363 201 1.189024 2.38993824 Phomopsis viticola mitovirus 962_1 2836441 Viruses Viruses 311 2.61e-80   NTclustered gi|2048077198|gb|MZ050806.1| 2836441 g24919 i0 95 0.995024875621891 200 7 99 3 2 200 212 409 Phomopsis viticola mitovirus 962_1 RNA-dependent RNA polymerase gene, complete cds blastn 200 311 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Phomopsis viticola mitovirus 962_1
4493182 4493182 PRJNA683902_S_NODE_20804_length_231_cov_2.376289_g20360_i0 PRJNA683902 20804 231 2.376289 5.48922759 Ripaglys virus 3130696 Viruses Viruses 176 1.17e-39   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g20360 i0 86.667 19.0779220779221 165 14 70 8 62 222 2145 2305 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 4407 176 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus
4493300 4493300 PRJNA683902_S_NODE_34944_length_162_cov_1.872000_g34500_i0 PRJNA683902 34944 162 1.872 3.03264 Alternaria dianthicola narnavirus 1 2992030 Viruses Viruses 126 7.83e-25   NTclustered gi|2324515426|gb|ON843756.1| 2992030 g34500 i0 86.441 0.728395061728395 118 12 72 4 9 124 1440 1325 Alternaria dianthicola narnavirus 1 isolate HNSZ-1 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 118 126 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Alternaria dianthicola narnavirus 1
12144719 12144719 PRJNA683902_S_NODE_32410_length_170_cov_1.466165_g31966_i0 PRJNA683902 32410 170 1.466165 2.4924805 Phomopsis viticola mitovirus 962_1 2836441 Viruses Viruses 270 3.61e-68   NTclustered gi|2048077198|gb|MZ050806.1| 2836441 g31966 i0 95.294 1 170 8 100 0 1 170 1862 2031 Phomopsis viticola mitovirus 962_1 RNA-dependent RNA polymerase gene, complete cds blastn 170 270 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Phomopsis viticola mitovirus 962_1
12144722 12144722 PRJNA683902_S_NODE_330_length_4577_cov_602.165639_g312_i0 PRJNA683902 330 4577 602.165639 27561.12129703 Totivirus ichi 3432942 Viruses Viruses 8287 0   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g312 i0 99.495 23.8029276818877 4556 23 99 0 19 4574 4579 24 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 108946 8287 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
23618202 23618202 PRJNA683902_S_NODE_30139_length_178_cov_1.432624_g29695_i0 PRJNA683902 30139 178 1.432624 2.55007072 Phomopsis viticola mitovirus 962_1 2836441 Viruses Viruses 298 1.75e-76   NTclustered gi|2048077198|gb|MZ050806.1| 2836441 g29695 i0 97.701 0.97752808988764 174 3 97 1 6 178 1771 1598 Phomopsis viticola mitovirus 962_1 RNA-dependent RNA polymerase gene, complete cds blastn 174 298 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Phomopsis viticola mitovirus 962_1
27504771 27504771 PRJNA683902_S_NODE_33023_length_168_cov_1.450382_g32579_i0 PRJNA683902 33023 168 1.450382 2.43664176 Deltaflexivirus 2169569 Viruses Viruses 87.4 2.51e-18   NR QKN22675.1 2743100 g32579 i0 69.1 3.98214285714286 55 17 98.2 0 4 168 638 692 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 669 87.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3
27851775 27851775 PRJNA683902_S_NODE_39064_length_152_cov_1.686957_g38620_i0 PRJNA683902 39064 152 1.686957 2.56417464 Viruses 10239 Viruses Viruses 81.6 2.06e-16   NR QKN22675.1 2743100 g38620 i0 76 1.97368421052632 50 12 98.7 0 150 1 1693 1742 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 300 81.6 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3
28124497 28124497 PRJNA683902_S_NODE_36865_length_157_cov_1.950000_g36421_i0 PRJNA683902 36865 157 1.95 3.0615 Fusarium deltaflexivirus 2 2973081 Viruses Viruses 77 9.53e-15   NR BDQ13824.1 2973081 g36421 i0 65.4 1.98726114649682 52 18 99.4 0 156 1 367 418 BDQ13824.1 unnamed protein product [Fusarium deltaflexivirus 2] diamond 312 77 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Fusarium deltaflexivirus 2
28262176 28262176 PRJNA683902_S_NODE_27306_length_190_cov_3.294118_g26862_i0 PRJNA683902 27306 190 3.294118 6.2588242 Chuvivirus 2842604 Viruses Viruses 103 6.11e-24   NR WET19887.1 2842604 g26862 i0 75.4 1.92631578947368 61 15 96.3 0 188 6 290 350 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 366 103 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
28313975 28313975 PRJNA683902_S_NODE_19946_length_239_cov_1.108911_g19502_i0 PRJNA683902 19946 239 1.108911 2.65029729 Erysiphe necator associated flexivirus 1 2743098 Viruses Viruses 105 2.97e-24   NR QKN22686.1 2743098 g19502 i0 64.9 0.96652719665272 77 27 96.7 0 9 239 511 587 QKN22686.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 1] diamond 231 105 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 1
28882134 28882134 PRJNA683902_S_NODE_10428_length_439_cov_2.587065_g9987_i0 PRJNA683902 10428 439 2.587065 11.35721535 Erysiphe necator associated narnavirus 48 2736405 Viruses Viruses 159 7.259999999999998e-42   NR QJT93780.1 2736405 g9987 i0 60.2 1.74259681093394 128 50 87.5 1 3 386 883 1009 QJT93780.1 RNA-dependent RNA polymerase [Erysiphe necator associated narnavirus 48] diamond 765 159 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Erysiphe necator associated narnavirus 48
28988819 28988819 PRJNA683902_S_NODE_28228_length_186_cov_1.436242_g27784_i0 PRJNA683902 28228 186 1.436242 2.67141012 Deltaflexivirus 2169569 Viruses Viruses 52.8 5.06e-6   NR QKN22686.1 2743098 g27784 i0 41.8 1.91935483870968 55 32 88.7 0 15 179 1036 1090 QKN22686.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 1] diamond 357 53.1 0.994350282485876 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 1
29008876 29008876 PRJNA683902_S_NODE_7548_length_630_cov_3.853288_g7155_i0 PRJNA683902 7548 630 3.853288 24.2757144 Erysiphe necator umbra-like virus 2 2695368 Viruses Viruses 149 3.43e-40   NR QHD64839.1 2695368 g7155 i0 64 0.542857142857143 114 41 54.3 0 5 346 175 288 QHD64839.1 ORF-B [Erysiphe necator umbra-like virus 2] diamond 342 149 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Umbravirus Erysiphe necator umbra-like virus 2
29367524 29367524 PRJNA683902_S_NODE_14629_length_313_cov_4.721014_g14185_i0 PRJNA683902 14629 313 4.721014 14.77677382 Umbravirus 39734 Viruses Viruses 136 1.99e-35   NR QOE55597.1 2741667 g14185 i0 71.1 1.9073482428115 97 28 93 0 292 2 30 126 QOE55597.1 RNA-dependent RNA polymerase [Macrophomina phaseolina umbra-like virus 3] diamond 597 136 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Umbravirus Macrophomina phaseolina umbra-like virus 3
29387554 29387554 PRJNA683902_S_NODE_10249_length_449_cov_2.046117_g9810_i0 PRJNA683902 10249 449 2.046117 9.18706533 Pestalotiopsis deltaflexivirus 1 2816841 Viruses Viruses 52 2.04e-4   NR QTH80200.1 2816841 g9810 i0 35.1 0.648106904231626 97 61 64.1 2 289 2 706 801 QTH80200.1 MAG: RNA-dependent RNA polymerase [Pestalotiopsis deltaflexivirus 1] diamond 291 52 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Pestalotiopsis deltaflexivirus 1
29525441 29525441 PRJNA683902_S_NODE_32190_length_171_cov_1.029851_g31746_i0 PRJNA683902 32190 171 1.029851 1.76104521 Narnavirus 186767 Viruses Viruses 78.6 3.4e-15   NR WRK14128.1 3111966 g31746 i0 70.2 2 57 17 100 0 171 1 701 757 WRK14128.1 RNA-dependent RNA polymerase [Nigrospora sphaerica narnavirus 1] diamond 342 79.3 0.991172761664565 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Nigrospora sphaerica narnavirus 1
29545159 29545159 PRJNA683902_S_NODE_16570_length_279_cov_2.797521_g16126_i0 PRJNA683902 16570 279 2.797521 7.80508359 Grapevine-associated tymo-like virus 2 2814378 Viruses Viruses 144 9.209999999999999e-40   NR QXN75448.1 2814378 g16126 i0 77.2 0.989247311827957 92 21 98.9 0 2 277 223 314 QXN75448.1 MAG: RNA-dependent RNA polymerase, partial [Grapevine-associated tymo-like virus 2] diamond 276 144 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Grapevine-associated tymo-like virus 2
31946956 31946956 PRJNA683902_S_NODE_4057_length_1145_cov_4.355596_g3828_i0 PRJNA683902 4057 1145 4.355596 49.8715742 Macrophomina phaseolina umbra-like virus 1 2741665 Viruses Viruses 280 3.28e-86   NR QOE55594.1 2741665 g3828 i0 51.1 1.45152838427948 276 134 72.1 1 1140 316 234 509 QOE55594.1 RNA-dependent RNA polymerase [Macrophomina phaseolina umbra-like virus 1] diamond 1662 280 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Umbravirus Macrophomina phaseolina umbra-like virus 1
32295552 32295552 PRJNA683902_S_NODE_20039_length_238_cov_1.572139_g19595_i0 PRJNA683902 20039 238 1.572139 3.74169082 Erysiphe necator associated flexivirus 3 2743100 Viruses Viruses 113 5.660000000000001e-27   NR QKN22675.1 2743100 g19595 i0 65.4 0.983193277310924 78 27 98.3 0 3 236 221 298 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 234 113 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;