RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683902", tax_kingdom = "Metazoa" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5768887 5768887 PRJNA683902_S_NODE_23805_length_210_cov_1.606936_g23361_i0 PRJNA683902 23805 210 1.606936 3.3745656 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 73.1 1.41e-8   NTclustered gi|196009976|ref|XM_002114817.1| 10228 g23361 i0 93.75 3.11428571428571 48 3 23 0 139 186 402 449 Trichoplax adhaerens expressed hypothetical protein (TRIADDRAFT_64133), partial mRNA blastn 654 73.1 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
17243245 17243245 PRJNA683902_S_NODE_27574_length_189_cov_1.861842_g27130_i0 PRJNA683902 27574 189 1.861842 3.51888138 Placozoa sp. H4 1034858 Placozoa other_Eukaryota 106 1.23e-18   NTclustered gi|469664430|gb|KC465310.1| 1034858 g27130 i0 78.363 12.9259259259259 171 31 89 6 22 189 425 258 Placozoa sp. H4 60S ribosomal protein L23a (Rpl23) mRNA, complete cds blastn 2443 106 1 Eukaryota Opisthokonta Metazoa Placozoa         Placozoa sp. H4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;