RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683902", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13929300 13929300 PRJNA683902_S_NODE_20131_length_237_cov_2.470000_g19687_i0 PRJNA683902 20131 237 2.47 5.8539 Fimbriimonas 1005038 Bacteria Bacteria 339 1.4599999999999998e-88   NTclustered gi|663071213|gb|CP007139.1| 661478 g19687 i0 92.766 252.168776371308 235 15 99 1 1 235 28373 28605 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 59764 339 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
24891501 24891501 PRJNA683902_S_NODE_40020_length_150_cov_1.442478_g39576_i0 PRJNA683902 40020 150 1.442478 2.163717 Armatimonadetes bacterium Uphvl-Ar2 2004468 Bacteria Bacteria 167 4.18e-37   NTclustered gi|1199101103|gb|CP021424.1| 2004468 g39576 i0 86.755 7.01333333333333 151 18 100 2 1 150 2201936 2201787 Armatimonadetes bacterium Uphvl-Ar2 genome blastn 1052 167 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;