RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683902", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA683902 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26670400 26670400 PRJNA683902_S_NODE_7281_length_656_cov_2.909532_g6898_i0 PRJNA683902 7281 656 2.909532 19.08652992 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 268 1.7e-86   NR ETO17605.1 46433 g6898 i0 70.7 0.983231707317073 215 5 98.3 1 3 647 145 301 ETO17605.1 Flagellar capping protein, partial [Reticulomyxa filosa] diamond 645 268 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31346261 31346261 PRJNA683902_S_NODE_39396_length_151_cov_2.719298_g38952_i0 PRJNA683902 39396 151 2.719298 4.10613998 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 94.4 1.2300000000000002e-21   NR ETO17605.1 46433 g38952 i0 94 0.993377483443709 50 3 99.3 0 2 151 73 122 ETO17605.1 Flagellar capping protein, partial [Reticulomyxa filosa] diamond 150 94.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;