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contig_metadata

10 rows where bioproject = "PRJNA683902", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 10 ✖

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA683902 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
665274 665274 PRJNA683902_S_NODE_24701_length_204_cov_6.616766_g24257_i0 PRJNA683902 24701 204 6.616766 13.49820264 Thaumatomastix sp. CC002-Boundary Bay 741090 SAR_Eukaryotes SAR_Eukaryotes 270 4.5099999999999985e-68   NTclustered gi|290760490|gb|GQ144693.1| 741090 g24257 i0 91.133 100.372549019608 203 13 99 1 1 203 1991 1794 Thaumatomastix sp. CC002-Boundary Bay large subunit ribosomal RNA gene, partial sequence blastn 20476 270 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomastix Thaumatomastix sp. CC002-Boundary Bay
1175507 1175507 PRJNA683902_S_NODE_29461_length_180_cov_4.139860_g29017_i0 PRJNA683902 29461 180 4.13986 7.451748 Thaumatomastigidae 45098 SAR_Eukaryotes SAR_Eukaryotes 265 1.8e-66   NTclustered gi|88792586|gb|DQ386167.1| 188980 g29017 i0 93.333 72.5 180 10 99 2 3 180 1791 1612 Thaumatomastix sp. ATCC 50250 28S ribosomal RNA gene, partial sequence blastn 13050 265 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomastix Thaumatomastix sp. ATCC 50250
3216156 3216156 PRJNA683902_S_NODE_25243_length_201_cov_5.701220_g24799_i0 PRJNA683902 25243 201 5.70122 11.4594522 Clautriavia biflagellata 645452 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.9e-5   NTclustered gi|290760479|gb|GQ144682.1| 645452 g24799 i0 97.222 0.358208955223881 36 1 18 0 165 200 781 816 Cercozoa sp. Brady Beach 2007 large subunit ribosomal RNA gene, partial sequence blastn 72 62.1 1 Eukaryota Sar   Cercozoa       Clautriavia Clautriavia biflagellata
9593972 9593972 PRJNA683902_S_NODE_31888_length_172_cov_1.177778_g31444_i0 PRJNA683902 31888 172 1.177778 2.02577816 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 163 6.390000000000001e-36   NTclustered gi|88792583|gb|DQ386164.1| 372086 g31444 i0 84.181 5.41860465116279 177 18 100 8 1 172 1765 1936 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 932 163 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9594022 9594022 PRJNA683902_S_NODE_38228_length_154_cov_1.333333_g37784_i0 PRJNA683902 38228 154 1.333333 2.05333282 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 172 9.3e-39   NTclustered gi|238617604|gb|FJ973379.1| 646463 g37784 i0 87.013 84.4025974025974 154 19 100 1 1 154 1606 1454 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 12998 172 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
13419149 13419149 PRJNA683902_S_NODE_14911_length_308_cov_3.723247_g14467_i0 PRJNA683902 14911 308 3.723247 11.46760076 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 239 2.06e-58   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g14467 i0 81.788 34.6688311688312 302 40 97 11 1 298 3731 4021 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 10678 239 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14694290 14694290 PRJNA683902_S_NODE_30312_length_177_cov_2.364286_g29868_i0 PRJNA683902 30312 177 2.364286 4.18478622 Bodomorpha sp. HFCC56 352464 SAR_Eukaryotes SAR_Eukaryotes 219 1.3899999999999997e-52   NTclustered gi|83034974|gb|DQ211603.1| 352464 g29868 i0 89.266 96.4293785310734 177 16 100 1 1 177 456 283 Bodomorpha sp. HFCC56 28S ribosomal RNA gene, partial sequence blastn 17068 219 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC56
15967884 15967884 PRJNA683902_S_NODE_12593_length_360_cov_5.560372_g12149_i0 PRJNA683902 12593 360 5.560372 20.0173392 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 305 2.37e-78   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g12149 i0 84.161 11.2055555555556 322 44 89 5 40 360 4022 3707 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4034 305 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
17243270 17243270 PRJNA683902_S_NODE_30534_length_176_cov_3.230216_g30090_i0 PRJNA683902 30534 176 3.230216 5.68518016 Sandona mutans 563755 SAR_Eukaryotes SAR_Eukaryotes 322 1.02e-83   NTclustered gi|224996445|gb|FJ654277.1| 563755 g30090 i0 100 98.8522727272727 174 0 99 0 3 176 678 505 Cercozoa sp. ATCC50314p145at3 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17398 322 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans
21067652 21067652 PRJNA683902_S_NODE_14737_length_311_cov_5.062044_g14293_i0 PRJNA683902 14737 311 5.062044 15.74295684 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 235 2.6899999999999995e-57   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g14293 i0 81.481 32.4887459807074 297 46 95 8 15 311 4018 3731 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 10104 235 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;