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contig_metadata

19 rows where bioproject = "PRJNA683902" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 19 ✖

bioproject 1

  • PRJNA683902 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
665383 665383 PRJNA683902_S_NODE_35781_length_160_cov_0.951220_g35337_i0 PRJNA683902 35781 160 0.95122 1.521952 uncultured Naegleria 229031 Heterolobosea other_Eukaryota 296 5.55e-76   NTclustered gi|2206187049|gb|OM946712.1| 229031 g35337 i0 100 100.0125 160 0 100 0 1 160 57 216 Uncultured Naegleria clone STP_A-OC-42 small subunit ribosomal RNA gene, partial sequence blastn 16002 296 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae   uncultured Naegleria
2450919 2450919 PRJNA683902_S_NODE_33942_length_165_cov_1.500000_g33498_i0 PRJNA683902 33942 165 1.5 2.475 Naegleria 5761 Heterolobosea other_Eukaryota 278 2.09e-70   NTclustered gi|2618963742|gb|OR769034.1| 5762 g33498 i0 96.97 21.0121212121212 165 5 100 0 1 165 2663 2827 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3467 278 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3727439 3727439 PRJNA683902_S_NODE_34103_length_164_cov_4.606299_g33659_i0 PRJNA683902 34103 164 4.606299 7.55433036 Peranema 3287 Euglenozoa other_Eukaryota 287 3.45e-73   NTclustered gi|1803019098|gb|MT007870.1| 56466 g33659 i0 98.171 5.69512195121951 164 3 100 0 1 164 1027 1190 Peranema trichophorum strain PtR small subunit ribosomal RNA gene, partial sequence blastn 934 287 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
4493292 4493292 PRJNA683902_S_NODE_34124_length_164_cov_3.480315_g33680_i0 PRJNA683902 34124 164 3.480315 5.7077166 Bodo saltans 75058 Euglenozoa other_Eukaryota 294 2.06e-75   NTclustered gi|77994634|gb|DQ207572.1| 75058 g33680 i0 99.383 92.9146341463415 162 1 99 0 1 162 1292 1453 Bodo saltans strain HFCC309 18S ribosomal RNA gene, partial sequence blastn 15238 294 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
6279155 6279155 PRJNA683902_S_NODE_13585_length_335_cov_4.291946_g13141_i0 PRJNA683902 13585 335 4.291946 14.3780191 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 409 1.63e-109   NTclustered gi|2593250474|emb|OY748421.1| 5660 g13141 i0 89.053 133.534328358209 338 25 98 10 1 329 989792 990126 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 44734 409 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
7043880 7043880 PRJNA683902_S_NODE_17906_length_261_cov_1.625000_g17462_i0 PRJNA683902 17906 261 1.625 4.24125 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 427 3.38e-115   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g17462 i0 96.169 7.36015325670498 261 10 100 0 1 261 2229 1969 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1921 427 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8318590 8318590 PRJNA683902_S_NODE_5267_length_916_cov_8.734926_g4979_i0 PRJNA683902 5267 916 8.734926 80.01192216 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1520 0   NTclustered gi|27461806|gb|AY130826.1| 56466 g4979 i0 96.627 1.55131004366812 919 26 100 4 1 916 22 938 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 1421 1520 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
12144626 12144626 PRJNA683902_S_NODE_19910_length_239_cov_2.361386_g19466_i0 PRJNA683902 19910 239 2.361386 5.64371254 Neobodo designis 312471 Euglenozoa other_Eukaryota 363 8.74e-96   NTclustered gi|77994645|gb|DQ207583.1| 312471 g19466 i0 95.238 93.7615062761506 231 8 96 3 1 230 777 1005 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 22409 363 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
13419196 13419196 PRJNA683902_S_NODE_19411_length_244_cov_3.454106_g18967_i0 PRJNA683902 19411 244 3.454106 8.42801864 Neobodo designis 312471 Euglenozoa other_Eukaryota 359 1.16e-94   NTclustered gi|77994645|gb|DQ207583.1| 312471 g18967 i0 93.089 98.8114754098361 246 15 100 1 1 244 169 414 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 24110 359 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
17243211 17243211 PRJNA683902_S_NODE_23954_length_209_cov_2.040698_g23510_i0 PRJNA683902 23954 209 2.040698 4.26505882 Sphenomonas teres 2704098 Euglenozoa other_Eukaryota 128 2.96e-25   NTclustered gi|1803019523|gb|MT007909.1| 2704098 g23510 i0 87.387 24.1913875598086 111 14 53 0 93 203 293 403 Sphenomonas teres isolate UJL5 small subunit ribosomal RNA gene, partial sequence blastn 5056 128 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Sphenomonadidae Sphenomonas Sphenomonas teres
17243262 17243262 PRJNA683902_S_NODE_29814_length_179_cov_1.894366_g29370_i0 PRJNA683902 29814 179 1.894366 3.39091514 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 292 8.210000000000001e-75   NTclustered gi|27461806|gb|AY130826.1| 56466 g29370 i0 97.126 0.972067039106145 174 4 97 1 7 179 968 1141 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 174 292 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
17753165 17753165 PRJNA683902_S_NODE_22334_length_219_cov_5.379121_g21890_i0 PRJNA683902 22334 219 5.379121 11.78027499 Trypanosoma 5690 Euglenozoa other_Eukaryota 289 1.36e-73   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g21890 i0 91.429 118.114155251142 210 18 96 0 5 214 64 273 T.cruzi S3 ribosomal RNA gene blastn 25867 289 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
19792204 19792204 PRJNA683902_S_NODE_19796_length_240_cov_4.576355_g19352_i0 PRJNA683902 19796 240 4.576355 10.983252 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 416 6.649999999999998e-112   NTclustered gi|1803019516|gb|MT007902.1| 56466 g19352 i0 97.917 29.3291666666667 240 5 100 0 1 240 442 203 Peranema trichophorum isolate PP8 small subunit ribosomal RNA gene, partial sequence blastn 7039 416 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
19792304 19792304 PRJNA683902_S_NODE_29236_length_181_cov_2.979167_g28792_i0 PRJNA683902 29236 181 2.979167 5.3922922700000004 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 335 1.36e-87   NTclustered gi|1803019516|gb|MT007902.1| 56466 g28792 i0 100 6.37016574585635 181 0 100 0 1 181 1057 877 Peranema trichophorum isolate PP8 small subunit ribosomal RNA gene, partial sequence blastn 1153 335 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
22853030 22853030 PRJNA683902_S_NODE_34998_length_162_cov_1.560000_g34554_i0 PRJNA683902 34998 162 1.56 2.5272 Peranema 3287 Euglenozoa other_Eukaryota 294 2.03e-75   NTclustered gi|1803019098|gb|MT007870.1| 56466 g34554 i0 99.383 4.98148148148148 162 1 100 0 1 162 1986 1825 Peranema trichophorum strain PtR small subunit ribosomal RNA gene, partial sequence blastn 807 294 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
24891401 24891401 PRJNA683902_S_NODE_25080_length_202_cov_3.769697_g24636_i0 PRJNA683902 25080 202 3.769697 7.61478794 Euglena sp. MI32 392904 Euglenozoa other_Eukaryota 65.8 2.26e-6   NTclustered gi|209362338|gb|DQ140123.2| 392904 g24636 i0 93.182 1.98514851485149 44 3 22 0 75 118 3578 3535 Euglena sp. MI32 large subunit ribosomal RNA gene, partial sequence blastn 401 65.8 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena sp. MI32
25402068 25402068 PRJNA683902_S_NODE_31080_length_174_cov_4.459854_g30636_i0 PRJNA683902 31080 174 4.459854 7.76014596 Kinetoplastea 5653 Euglenozoa other_Eukaryota 322 1.01e-83   NTclustered gi|28076818|gb|AF530517.1| 212100 g30636 i0 100 100.005747126437 174 0 100 0 1 174 1018 1191 Uncultured bodonid clone AT5-48 18S ribosomal RNA gene, partial sequence blastn 17401 322 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   uncultured bodonid
26924057 26924057 PRJNA683902_S_NODE_39142_length_152_cov_1.347826_g38698_i0 PRJNA683902 39142 152 1.347826 2.04869552 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 69.7 8.71e-13   NR KAJ9460647.1 91374 g38698 i0 66.7 0.947368421052632 48 16 94.7 0 150 7 62 109 KAJ9460647.1 60S ribosomal protein L13 [Diplonema papillatum] diamond 144 69.7 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28313978 28313978 PRJNA683902_S_NODE_24286_length_207_cov_1.535294_g23842_i0 PRJNA683902 24286 207 1.535294 3.17805858 Stygiella incarcerata 1712417 Root_unresolved Root_unresolved 96.7 1.5199999999999995e-23   NR ANM86218.1 1712417 g23842 i0 64.7 7.88405797101449 68 24 98.6 0 2 205 18 85 ANM86218.1 40S ribosomal protein S18 [Stygiella incarcerata] diamond 1632 96.7 1 Eukaryota Discoba       Jakobida Stygiellidae Stygiella Stygiella incarcerata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;