RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA683902", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA683902 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
665220 665220 PRJNA683902_S_NODE_18141_length_258_cov_2.868778_g17697_i0 PRJNA683902 18141 258 2.868778 7.40144724 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 350 7.44e-92   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g17697 i0 91.085 442.480620155039 258 23 100 0 1 258 3680042 3679785 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 114160 350 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
5769010 5769010 PRJNA683902_S_NODE_39005_length_152_cov_2.026087_g38561_i0 PRJNA683902 39005 152 2.026087 3.07965224 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 182 1.52e-41   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g38561 i0 88.742 133.368421052632 151 14 99 3 3 152 3682302 3682154 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 20272 182 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
18517497 18517497 PRJNA683902_S_NODE_38435_length_153_cov_3.008621_g37991_i0 PRJNA683902 38435 153 3.008621 4.60319013 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 178 1.98e-40   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g37991 i0 87.582 106.830065359477 153 19 100 0 1 153 3680962 3681114 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 16345 178 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29671218 29671218 PRJNA683902_S_NODE_31290_length_174_cov_1.394161_g30846_i0 PRJNA683902 31290 174 1.394161 2.42584014 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 60.5 1.84e-9   NR MBX9724270.1 2364082 g30846 i0 93.3 0.517241379310345 30 2 51.7 0 2 91 141 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 90 60.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;