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contig_metadata

34 rows where bioproject = "PRJNA683669", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 34 ✖

tax_phylum 1

  • Acidobacteriota · 34 ✖

tax_kingdom 1

bioproject 1

  • PRJNA683669 · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664965 664965 PRJNA683669_P_NODE_26041_length_251_cov_0.865169_g25809_i0 PRJNA683669 26041 251 0.865169 2.17157419 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 168 4.69e-47   NR MFN7913980.1 2910147 g25809 i0 97.6 0.99203187250996006 83 2 99.2 0 250 2 112 194 MFN7913980.1 nitrite/sulfite reductase [Vicinamibacterales bacterium] diamond 249 168 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
1940982 1940982 PRJNA683669_P_NODE_28122_length_249_cov_0.875000_g27890_i0 PRJNA683669 28122 249 0.875 2.17875 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 107 2.16e-26   NR MDZ4801331.1 2212468 g27890 i0 67.4 1.03614457831325 86 18 100 2 1 249 27 105 MDZ4801331.1 tetratricopeptide repeat protein [Bryobacteraceae bacterium] diamond 258 107 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
7552705 7552705 PRJNA683669_P_NODE_11526_length_380_cov_1.361564_g11295_i0 PRJNA683669 11526 380 1.361564 5.1739432 Chloracidobacterium 458032 Bacteria Bacteria 52.8 0.036   NTclustered gi|2033635510|gb|CP072632.1| 458033 g11295 i0 100 0.589473684210526 28 0 7 0 111 138 1583414 1583387 Chloracidobacterium thermophilum strain B chromosome 1, complete sequence blastn 224 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium thermophilum
8318045 8318045 PRJNA683669_P_NODE_12107_length_371_cov_1.805369_g11876_i0 PRJNA683669 12107 371 1.805369 6.69791899 Bacteria 2 Bacteria Bacteria 122 1.71e-29   NR MCB1054384.1 1978231 g11876 i0 50.4 3.71967654986523 119 57 96.2 1 13 369 154 270 MCB1054384.1 M4 family metallopeptidase [Acidobacteriota bacterium] diamond 1380 122 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
10869072 10869072 PRJNA683669_P_NODE_8089_length_449_cov_2.571809_g7858_i0 PRJNA683669 8089 449 2.571809 11.54742241 Thermoanaerobaculaceae bacterium 2699758 Bacteria Bacteria 52.8 0.043   NTclustered gi|2874254005|emb|OY970330.1| 2699758 g7858 i0 100 0.0623608017817372 28 0 6 0 174 201 6298384 6298411 MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Thermoanaerobaculaceae   Thermoanaerobaculaceae bacterium
14693994 14693994 PRJNA683669_P_NODE_31732_length_244_cov_0.900585_g31500_i0 PRJNA683669 31732 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 127 2.85e-36   NR MSV34983.1 2026791 g31500 i0 92.8 5.93852459016393 69 5 84.8 0 244 38 21 89 MSV34983.1 30S ribosomal protein S15 [Bryobacterales bacterium] diamond 1449 127 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
19791847 19791847 PRJNA683669_P_NODE_16176_length_322_cov_1.546185_g15945_i0 PRJNA683669 16176 322 1.546185 4.9787157 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 320 7.5e-83   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g15945 i0 85 113.723602484472 320 42 99 6 5 322 3557775 3557460 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 36619 320 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
23617858 23617858 PRJNA683669_P_NODE_25659_length_253_cov_1.127778_g25427_i0 PRJNA683669 25659 253 1.127778 2.85327834 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 189 1.31e-58   NR MEQ1728247.1 2910147 g25427 i0 97.6 0.99604743083004 84 2 99.6 0 2 253 121 204 MEQ1728247.1 bidirectional hydrogenase complex protein HoxU [Vicinamibacterales bacterium] diamond 252 189 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
24891132 24891132 PRJNA683669_P_NODE_29680_length_247_cov_0.885057_g29448_i0 PRJNA683669 29680 247 0.885057 2.18609079 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 159 2.07e-46   NR HLH03247.1 2212468 g29448 i0 89 9.94736842105263 82 9 99.6 0 247 2 104 185 HLH03247.1 phytanoyl-CoA dioxygenase family protein [Bryobacteraceae bacterium] diamond 2457 159 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26638949 26638949 PRJNA683669_P_NODE_20281_length_286_cov_2.169014_g20049_i0 PRJNA683669 20281 286 2.169014 6.20338004 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 50.1 1.53e-4   NR MEO6392866.1 2283092 g20049 i0 49.1 0.576923076923077 55 26 57.7 1 36 200 30 82 MEO6392866.1 alginate lyase family protein [Pyrinomonadaceae bacterium] diamond 165 50.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27062133 27062133 PRJNA683669_P_NODE_15762_length_327_cov_0.909449_g15531_i0 PRJNA683669 15762 327 0.909449 2.97389823 root 1 Root_unresolved Root_unresolved 63.5 6.73e-10   NR OFW09435.1 1797184 g15531 i0 38.5 2.78899082568807 96 54 83.5 1 312 40 27 122 OFW09435.1 MAG: hypothetical protein A3H96_02025 [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_36] diamond 912 63.9 0.993740219092332 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_36
27303556 27303556 PRJNA683669_P_NODE_21883_length_277_cov_1.372549_g21651_i0 PRJNA683669 21883 277 1.372549 3.80196073 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 121 8.52e-30   NR MFB3778600.1 2212468 g21651 i0 64.1 3.97472924187726 92 33 99.6 0 276 1 494 585 MFB3778600.1 asparagine synthase (glutamine-hydrolyzing) [Bryobacteraceae bacterium] diamond 1101 121 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
27587790 27587790 PRJNA683669_P_NODE_4264_length_632_cov_1.556351_g4040_i0 PRJNA683669 4264 632 1.556351 9.83613832 Acidobacteriota bacterium 1978231 Bacteria Bacteria 157 3.28e-41   NR NOZ79954.1 1978231 g4040 i0 39.2 1.97943037974684 209 117 99.2 4 629 3 61 259 NOZ79954.1 NAD(P)/FAD-dependent oxidoreductase [Acidobacteriota bacterium] diamond 1251 157 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27650943 27650943 PRJNA683669_P_NODE_16964_length_315_cov_0.888430_g16733_i0 PRJNA683669 16964 315 0.88843 2.7985545 Terriglobia bacterium 2081523 Bacteria Bacteria 54.3 1.42e-6   NR PWU04931.1 2081523 g16733 i0 59.5 3.40952380952381 42 17 40 0 20 145 1 42 PWU04931.1 MAG: hypothetical protein C5B51_15835, partial [Terriglobia bacterium] diamond 1074 54.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
28388583 28388583 PRJNA683669_P_NODE_6466_length_504_cov_0.890951_g6235_i0 PRJNA683669 6466 504 0.890951 4.49039304 Pseudomonadati 3379134 Bacteria Bacteria 112 2.21e-25   NR HEV2730991.1 2282142 g6235 i0 52.1 5.10714285714286 94 45 56 0 502 221 668 761 HEV2730991.1 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein [Terriglobales bacterium] diamond 2574 112 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
28704527 28704527 PRJNA683669_P_NODE_1927_length_936_cov_1.863268_g1754_i0 PRJNA683669 1927 936 1.863268 17.44018848 Pseudomonadati 3379134 Bacteria Bacteria 49.7 0.00571   NR HEV8435252.1 2651171 g1754 i0 36.7 1.15064102564103 128 64 38.8 7 32 394 32 149 HEV8435252.1 CVNH domain-containing protein [Thermoanaerobaculia bacterium] diamond 1077 49.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28767451 28767451 PRJNA683669_P_NODE_33907_length_241_cov_0.916667_g33675_i0 PRJNA683669 33907 241 0.916667 2.20916747 Terriglobales 204433 Bacteria Bacteria 74.7 2.01e-13   NR WP_263419296.1 1592106 g33675 i0 60.3 1.8298755186722 73 26 87.1 2 210 1 485 557 WP_263419296.1 SMP-30/gluconolactonase/LRE family protein [Terriglobus albidus] diamond 441 74.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus albidus
29355933 29355933 PRJNA683669_P_NODE_32709_length_243_cov_0.905882_g32477_i0 PRJNA683669 32709 243 0.905882 2.20129326 Terriglobia bacterium 2081523 Bacteria Bacteria 145 1.19e-39   NR NDJ11845.1 2081523 g32477 i0 91.3 0.987654320987654 80 7 98.8 0 3 242 38 117 NDJ11845.1 NAD-dependent succinate-semialdehyde dehydrogenase [Terriglobia bacterium] diamond 240 145 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
29387526 29387526 PRJNA683669_P_NODE_27329_length_250_cov_0.870056_g27097_i0 PRJNA683669 27329 250 0.870056 2.17514 Bryobacterales bacterium 2026791 Bacteria Bacteria 164 7.689999999999999e-45   NR MBL8236159.1 2026791 g27097 i0 100 0.996 83 0 99.6 0 250 2 89 171 MBL8236159.1 protein kinase [Bryobacterales bacterium] diamond 249 164 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
29545147 29545147 PRJNA683669_P_NODE_33610_length_241_cov_1.363095_g33378_i0 PRJNA683669 33610 241 1.363095 3.28505895 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 50.8 4e-5   NR HEX9544672.1 2283092 g33378 i0 35.5 0.946058091286307 76 36 93.4 2 240 16 112 175 HEX9544672.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 228 50.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29576593 29576593 PRJNA683669_P_NODE_31290_length_245_cov_0.895349_g31058_i0 PRJNA683669 31290 245 0.895349 2.19360505 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 92.4 9.83e-20   NR MEO5925873.1 2212468 g31058 i0 88.7 0.648979591836735 53 6 64.9 0 51 209 120 172 MEO5925873.1 dihydrolipoamide acetyltransferase family protein [Bryobacteraceae bacterium] diamond 159 92.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29608034 29608034 PRJNA683669_P_NODE_29430_length_247_cov_0.885057_g29198_i0 PRJNA683669 29430 247 0.885057 2.18609079 Edaphobacter sp. 1934404 Bacteria Bacteria 62.4 4.74e-9   NR HEY6414536.1 1934404 g29198 i0 46.4 3.08502024291498 84 42 98.4 3 247 5 202 285 HEY6414536.1 Ig-like domain repeat protein [Edaphobacter sp.] diamond 762 62.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
29892793 29892793 PRJNA683669_P_NODE_21551_length_279_cov_1.320388_g21319_i0 PRJNA683669 21551 279 1.320388 3.68388252 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 46.2 0.00241   NR HEX4319705.1 2052142 g21319 i0 37 0.580645161290323 54 32 55.9 1 271 116 76 129 HEX4319705.1 DUF1353 domain-containing protein [Acidobacteriaceae bacterium] diamond 162 46.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30145047 30145047 PRJNA683669_P_NODE_32232_length_243_cov_0.905882_g32000_i0 PRJNA683669 32232 243 0.905882 2.20129326 Acidobacteriota bacterium 1978231 Bacteria Bacteria 86.7 1.22e-19   NR MBN2243084.1 1978231 g32000 i0 52.2 7.02469135802469 67 32 82.7 0 204 4 4 70 MBN2243084.1 DUF393 domain-containing protein [Acidobacteriota bacterium] diamond 1707 86.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30587513 30587513 PRJNA683669_P_NODE_11413_length_382_cov_0.996764_g11182_i0 PRJNA683669 11413 382 0.996764 3.80763848 Terracidiphilus sp. 1964191 Bacteria Bacteria 53.5 3.08e-5   NR HZL52458.1 1964191 g11182 i0 37.2 0.887434554973822 113 64 88 5 4 339 522 628 HZL52458.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Terracidiphilus sp.] diamond 339 53.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
30619212 30619212 PRJNA683669_P_NODE_31753_length_244_cov_0.900585_g31521_i0 PRJNA683669 31753 244 0.900585 2.1974274 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 75.9 6.51e-14   NR HTQ98636.1 3069120 g31521 i0 43.6 0.959016393442623 78 44 95.9 0 2 235 13 90 HTQ98636.1 hypothetical protein [Candidatus Acidiferrum sp.] diamond 234 75.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
30947054 30947054 PRJNA683669_P_NODE_9314_length_419_cov_1.459538_g9083_i0 PRJNA683669 9314 419 1.459538 6.11546422 Bacteria 2 Bacteria Bacteria 87 3.65e-17   NR OLC82887.1 1803452 g9083 i0 56.8 2.01909307875895 74 32 53 0 101 322 15 88 OLC82887.1 MAG: DEAD/DEAH box helicase [Acidobacteria bacterium 13_1_40CM_4_57_6] diamond 846 87 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium 13_1_40CM_4_57_6
31073325 31073325 PRJNA683669_P_NODE_28075_length_249_cov_0.875000_g27843_i0 PRJNA683669 28075 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 81.3 1.08e-15   NR MBZ5562838.1 2081523 g27843 i0 48.8 1.90361445783133 80 38 96.4 1 248 9 247 323 MBZ5562838.1 family 78 glycoside hydrolase catalytic domain [Terriglobia bacterium] diamond 474 81.6 0.996323529411765 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
31346235 31346235 PRJNA683669_P_NODE_29676_length_247_cov_0.885057_g29444_i0 PRJNA683669 29676 247 0.885057 2.18609079 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 144 3.3e-42   NR MEO5926096.1 2212468 g29444 i0 72.8 0.983805668016194 81 22 98.4 0 245 3 57 137 MEO5926096.1 hypothetical protein [Bryobacteraceae bacterium] diamond 243 144 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31662243 31662243 PRJNA683669_P_NODE_17857_length_306_cov_1.725322_g17625_i0 PRJNA683669 17857 306 1.725322 5.27948532 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 43.9 0.0305   NR HEV8347104.1 2910147 g17625 i0 33.3 0.852941176470588 87 45 85.3 3 267 7 445 518 HEV8347104.1 ankyrin repeat domain-containing protein [Vicinamibacterales bacterium] diamond 261 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31978700 31978700 PRJNA683669_P_NODE_27978_length_249_cov_0.875000_g27746_i0 PRJNA683669 27978 249 0.875 2.17875 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 80.9 1.26e-17   NR MBV8828448.1 2052142 g27746 i0 76.5 1.26506024096386 51 12 61.4 0 154 2 32 82 MBV8828448.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 315 80.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
32232151 32232151 PRJNA683669_P_NODE_28418_length_248_cov_0.880000_g28186_i0 PRJNA683669 28418 248 0.88 2.1824 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 56.2 4.75e-7   NR HEX7313911.1 2283092 g28186 i0 45 1.62096774193548 60 33 72.6 0 184 5 24 83 HEX7313911.1 GerMN domain-containing protein [Pyrinomonadaceae bacterium] diamond 402 56.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32327224 32327224 PRJNA683669_P_NODE_8859_length_430_cov_1.294118_g8628_i0 PRJNA683669 8859 430 1.294118 5.5647074 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 69.7 2.2e-11   NR HEY6140218.1 2651171 g8628 i0 35.1 2.47674418604651 131 42 91.4 3 38 430 106 193 HEY6140218.1 peptidylprolyl isomerase [Thermoanaerobaculia bacterium] diamond 1065 69.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32433594 32433594 PRJNA683669_P_NODE_33779_length_241_cov_0.916667_g33547_i0 PRJNA683669 33779 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 75.1 1.42e-13   NR HEY6414536.1 1934404 g33547 i0 53.4 2.87551867219917 73 34 90.9 0 18 236 185 257 HEY6414536.1 Ig-like domain repeat protein [Edaphobacter sp.] diamond 693 75.5 0.994701986754967 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;