contig_metadata
9 rows where bioproject = "PRJNA683669", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10103568 | 10103568 | PRJNA683669_P_NODE_31348_length_244_cov_1.795322_g31116_i0 | PRJNA683669 | 31348 | 244 | 1.795322 | 4.38058568 | Bdellovibrio | 958 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2663425168|dbj|AP029173.1| | 3113893 | g31116 | i0 | 100 | 0.344262295081967 | 28 | 0 | 11 | 0 | 203 | 230 | 36044 | 36071 | Bdellovibrio sp. CKG001 DNA, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. CKG001 | ||
| 27555849 | 27555849 | PRJNA683669_P_NODE_11064_length_388_cov_1.196825_g10833_i0 | PRJNA683669 | 11064 | 388 | 1.196825 | 4.643681 | Pseudobdellovibrio exovorus | 453816 | Bacteria | Bacteria | 63.2 | 1.28e-8 | NR | WP_015468752.1 | 453816 | g10833 | i0 | 47.3 | 0.425257731958763 | 55 | 29 | 42.5 | 0 | 18 | 182 | 340 | 394 | WP_015468752.1 thrombospondin type-1 domain-containing protein [Pseudobdellovibrio exovorus] | diamond | 165 | 63.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 28250602 | 28250602 | PRJNA683669_P_NODE_9066_length_425_cov_1.264205_g8835_i0 | PRJNA683669 | 9066 | 425 | 1.264205 | 5.37287125 | Pseudobdellovibrio sp. | 2862747 | Bacteria | Bacteria | 52.8 | 7.73e-5 | NR | MFN3697314.1 | 2862747 | g8835 | i0 | 30.9 | 0.663529411764706 | 94 | 57 | 64.2 | 3 | 276 | 4 | 294 | 382 | MFN3697314.1 adenylate/guanylate cyclase domain-containing protein [Pseudobdellovibrio sp.] | diamond | 282 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. | ||
| 28483429 | 28483429 | PRJNA683669_P_NODE_33546_length_241_cov_1.577381_g33314_i0 | PRJNA683669 | 33546 | 241 | 1.577381 | 3.80148821 | root | 1 | Root_unresolved | Root_unresolved | 89 | 1.86e-18 | NR | WP_015468752.1 | 453816 | g33314 | i0 | 50 | 1.99170124481328 | 82 | 36 | 95.9 | 2 | 239 | 9 | 323 | 404 | WP_015468752.1 thrombospondin type-1 domain-containing protein [Pseudobdellovibrio exovorus] | diamond | 480 | 89 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 29493739 | 29493739 | PRJNA683669_P_NODE_32410_length_243_cov_0.905882_g32178_i0 | PRJNA683669 | 32410 | 243 | 0.905882 | 2.20129326 | Bacteria | 2 | Bacteria | Bacteria | 125 | 9.62e-33 | NR | MCB0416915.1 | 2053517 | g32178 | i0 | 71.6 | 4 | 81 | 23 | 100 | 0 | 243 | 1 | 199 | 279 | MCB0416915.1 adenosine deaminase [Bdellovibrionales bacterium] | diamond | 972 | 125 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30524453 | 30524453 | PRJNA683669_P_NODE_15453_length_330_cov_1.198444_g15222_i0 | PRJNA683669 | 15453 | 330 | 1.198444 | 3.9548652 | Pseudobacteriovorax antillogorgiicola | 1513793 | Bacteria | Bacteria | 76.6 | 1.24e-13 | NR | WP_159455691.1 | 1513793 | g15222 | i0 | 37.7 | 0.963636363636364 | 106 | 63 | 95.5 | 2 | 3 | 317 | 410 | 513 | WP_159455691.1 FAD-dependent oxidoreductase [Pseudobacteriovorax antillogorgiicola] | diamond | 318 | 76.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Pseudobacteriovoracaceae | Pseudobacteriovorax | Pseudobacteriovorax antillogorgiicola | ||
| 30777326 | 30777326 | PRJNA683669_P_NODE_23234_length_268_cov_3.717949_g23002_i0 | PRJNA683669 | 23234 | 268 | 3.717949 | 9.96410332 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 65.9 | 4e-11 | NR | MBT3980100.1 | 2081706 | g23002 | i0 | 31.7 | 0.917910447761194 | 82 | 48 | 91.8 | 1 | 248 | 3 | 34 | 107 | MBT3980100.1 Hsp20/alpha crystallin family protein [Bacteriovoracaceae bacterium] | diamond | 246 | 65.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 30935352 | 30935352 | PRJNA683669_P_NODE_4754_length_595_cov_3.153257_g4529_i0 | PRJNA683669 | 4754 | 595 | 3.153257 | 18.76187915 | Pseudobdellovibrio exovorus | 453816 | Bacteria | Bacteria | 59.7 | 1.27e-6 | NR | WP_015468758.1 | 453816 | g4529 | i0 | 31.5 | 0.463865546218487 | 92 | 57 | 46.4 | 2 | 348 | 73 | 351 | 436 | WP_015468758.1 thrombospondin type-1 domain-containing protein [Pseudobdellovibrio exovorus] | diamond | 276 | 59.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 32073704 | 32073704 | PRJNA683669_P_NODE_31918_length_244_cov_0.900585_g31686_i0 | PRJNA683669 | 31918 | 244 | 0.900585 | 2.1974274 | Pseudobacteriovorax antillogorgiicola | 1513793 | Bacteria | Bacteria | 46.2 | 0.00216 | NR | WP_159455691.1 | 1513793 | g31686 | i0 | 49.1 | 0.676229508196721 | 55 | 27 | 67.6 | 1 | 242 | 78 | 61 | 114 | WP_159455691.1 FAD-dependent oxidoreductase [Pseudobacteriovorax antillogorgiicola] | diamond | 165 | 46.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Pseudobacteriovoracaceae | Pseudobacteriovorax | Pseudobacteriovorax antillogorgiicola |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;