RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683669", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA683669 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664940 664940 PRJNA683669_P_NODE_2261_length_864_cov_3.188369_g2078_i0 PRJNA683669 2261 864 3.188369 27.54750816 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 147 3.88e-30   NTclustered gi|2040452726|gb|CP074573.1| 2231116 g2078 i0 83.974 0.318287037037037 156 22 18 2 279 434 879477 879325 Tenericutes bacterium strain zrk4 chromosome, complete genome blastn 275 147 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium
28787296 28787296 PRJNA683669_P_NODE_30227_length_246_cov_0.890173_g29995_i0 PRJNA683669 30227 246 0.890173 2.18982558 Candidatus Izemoplasmatales bacterium 3018265 Bacteria Bacteria 56.6 4.83e-7   NR MDD3957452.1 3018265 g29995 i0 32.9 1 82 47 90.2 1 4 225 274 355 MDD3957452.1 alkaline phosphatase family protein [Candidatus Izemoplasmatales bacterium] diamond 246 56.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales     Candidatus Izemoplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;