RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA683669", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA683669 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27176789 27176789 PRJNA683669_P_NODE_23642_length_266_cov_1.295337_g23410_i0 PRJNA683669 23642 266 1.295337 3.44559642 Armatimonadota bacterium 2033014 Bacteria Bacteria 96.3 1.35e-21   NR MFN3650218.1 2033014 g23410 i0 52.8 1.00375939849624 89 38 95.9 1 1 255 219 307 MFN3650218.1 hypothetical protein [Armatimonadota bacterium] diamond 267 96.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27883393 27883393 PRJNA683669_P_NODE_28505_length_248_cov_0.880000_g28273_i0 PRJNA683669 28505 248 0.88 2.1824 FCB group 1783270 Bacteria Bacteria 44.3 0.0114   NR MCS6775409.1 2739509 g28273 i0 38.5 1.57258064516129 65 38 76.2 1 237 49 533 597 MCS6775409.1 tetratricopeptide repeat protein [Chthonomonadaceae bacterium] diamond 390 44.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
29766135 29766135 PRJNA683669_P_NODE_21471_length_279_cov_2.101942_g21239_i0 PRJNA683669 21471 279 2.101942 5.86441818 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 58.9 8.2e-8   NR HVT11824.1 2682144 g21239 i0 40.9 2.02150537634409 93 51 97.8 3 274 2 10 100 HVT11824.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 564 58.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32737482 32737482 PRJNA683669_P_NODE_23960_length_264_cov_1.209424_g23728_i0 PRJNA683669 23960 264 1.209424 3.19287936 Armatimonadota bacterium 2033014 Bacteria Bacteria 53.5 7.08e-6   NR HET6382023.1 2033014 g23728 i0 61.4 2 44 17 50 0 261 130 268 311 HET6382023.1 WD40 repeat domain-containing protein [Armatimonadota bacterium] diamond 528 53.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;