RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA683669", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA683669 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18517003 18517003 PRJNA683669_P_NODE_18195_length_303_cov_1.534783_g17963_i0 PRJNA683669 18195 303 1.534783 4.65039249 Haloplanus pelagicus 2949995 Archaea Archaea 62.1 4.69e-5   NTclustered gi|2252468271|gb|CP098518.1| 2949995 g17963 i0 97.222 1.73927392739274 36 1 12 0 16 51 612132 612097 Haloplanus sp. HW8-1 chromosome, complete genome blastn 527 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus pelagicus
26987128 26987128 PRJNA683669_P_NODE_34042_length_241_cov_0.916667_g33810_i0 PRJNA683669 34042 241 0.916667 2.20916747 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 78.2 1.19e-14   NR MCX9011172.1 2032688 g33810 i0 42.3 1.95435684647303 78 45 97.1 0 6 239 186 263 MCX9011172.1 DUF4062 domain-containing protein [Candidatus Methanoperedens sp.] diamond 471 78.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
27398340 27398340 PRJNA683669_P_NODE_10683_length_394_cov_0.959502_g10452_i0 PRJNA683669 10683 394 0.959502 3.78043788 Haloarculaceae archaeon 2497615 Archaea Archaea 56.6 2.54e-6   NR MEF8783563.1 2497615 g10452 i0 53.3 0.342639593908629 45 18 34.3 1 255 389 3 44 MEF8783563.1 carotenoid oxygenase family protein [Haloarculaceae archaeon] diamond 135 56.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
32717436 32717436 PRJNA683669_P_NODE_33200_length_242_cov_0.911243_g32968_i0 PRJNA683669 33200 242 0.911243 2.20520806 Haladaptatus 367188 Archaea Archaea 117 1.96e-28   NR PSP92602.1 1919173 g32968 i0 61.7 7.87190082644628 81 29 97.9 2 6 242 105 185 PSP92602.1 MAG: kinase anchor protein [Halobacteriales archaeon QS_4_62_28] diamond 1905 117 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QS_4_62_28

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;