RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683669", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA683669 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21577129 21577129 PRJNA683669_P_NODE_33957_length_241_cov_0.916667_g33725_i0 PRJNA683669 33957 241 0.916667 2.20916747 Lentisphaeria bacterium 2053569 Bacteria Bacteria 69.7 3.43e-12   NR MFA4945695.1 2053569 g33725 i0 43.4 0.946058091286307 76 41 94.6 1 228 1 26 99 MFA4945695.1 SDR family oxidoreductase [Lentisphaeria bacterium] diamond 228 69.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
29324168 29324168 PRJNA683669_P_NODE_29749_length_246_cov_1.786127_g29517_i0 PRJNA683669 29749 246 1.786127 4.39387242 Victivallales bacterium 2212475 Bacteria Bacteria 118 1.1000000000000002e-28   NR MBR0459803.1 2212475 g29517 i0 67.9 5.98780487804878 81 26 98.8 0 4 246 92 172 MBR0459803.1 glutamine synthetase III [Victivallales bacterium] diamond 1473 118 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;