RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683669", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA683669 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28598197 28598197 PRJNA683669_P_NODE_6307_length_510_cov_1.938215_g6077_i0 PRJNA683669 6307 510 1.938215 9.8848965 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 145 1.82e-38   NR MBX3043080.1 2026749 g6077 i0 61 0.694117647058824 118 46 69.4 0 355 2 16 133 MBX3043080.1 threonine ammonia-lyase [Ignavibacteriota bacterium] diamond 354 145 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
30714037 30714037 PRJNA683669_P_NODE_6454_length_504_cov_1.772622_g6223_i0 PRJNA683669 6454 504 1.772622 8.93401488 Ignavibacteria bacterium 2053306 Bacteria Bacteria 122 9.91e-29   NR MBZ0203838.1 2053306 g6223 i0 47.3 2.7202380952381 150 74 87.5 3 443 3 3 150 MBZ0203838.1 potassium transporter Kup [Ignavibacteria bacterium] diamond 1371 122 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;