RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA683669", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA683669 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27378512 27378512 PRJNA683669_P_NODE_31863_length_244_cov_0.900585_g31631_i0 PRJNA683669 31863 244 0.900585 2.1974274 FCB group 1783270 Bacteria Bacteria 80.5 2.94e-16   NR WP_015424222.1 456827 g31631 i0 70.7 8.38524590163934 58 17 71.3 0 71 244 32 89 WP_015424222.1 50S ribosomal protein L1 [Candidatus Cloacimonas acidaminovorans] diamond 2046 80.9 0.995055624227441 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas acidaminovorans
28483420 28483420 PRJNA683669_P_NODE_2066_length_903_cov_2.533735_g1887_i0 PRJNA683669 2066 903 2.533735 22.87962705 Pseudomonadati 3379134 Bacteria Bacteria 382 1.04e-122   NR RLC45985.1 2030808 g1887 i0 64.7 11.0166112956811 303 101 98.7 1 12 902 158 460 RLC45985.1 MAG: pyruvate, phosphate dikinase [Candidatus Cloacimonadota bacterium] diamond 9948 384 0.994791666666667 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;