contig_metadata
7 rows where bioproject = "PRJNA683669", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 665026 | 665026 | PRJNA683669_P_NODE_33601_length_241_cov_1.375000_g33369_i0 | PRJNA683669 | 33601 | 241 | 1.375 | 3.31375 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 130 | 4.2399999999999985e-34 | NR | AAP88974.1 | 5775 | g33369 | i0 | 77.2 | 0.983402489626556 | 79 | 18 | 98.3 | 0 | 237 | 1 | 1 | 79 | AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] | diamond | 237 | 130 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 5003350 | 5003350 | PRJNA683669_P_NODE_4484_length_615_cov_1.516605_g4260_i0 | PRJNA683669 | 4484 | 615 | 1.516605 | 9.32712075 | Vermamoeba | 1260114 | Tubulinea | other_Eukaryota | 1081 | 0 | NTclustered | gi|300078496|gb|GU001158.1| | 5778 | g4260 | i0 | 98.374 | 95.9886178861789 | 615 | 10 | 100 | 0 | 1 | 615 | 2337 | 2951 | Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 59033 | 1081 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 7043576 | 7043576 | PRJNA683669_P_NODE_15686_length_327_cov_1.818898_g15455_i0 | PRJNA683669 | 15686 | 327 | 1.818898 | 5.94779646 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 281 | 3.6e-71 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g15455 | i0 | 82.65 | 1.35779816513761 | 317 | 55 | 97 | 0 | 11 | 327 | 1 | 317 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 444 | 281 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 13419005 | 13419005 | PRJNA683669_P_NODE_32831_length_242_cov_1.485207_g32599_i0 | PRJNA683669 | 32831 | 242 | 1.485207 | 3.59420094 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 442 | 1.1099999999999995e-119 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g32599 | i0 | 99.587 | 94.4834710743802 | 242 | 1 | 100 | 0 | 1 | 242 | 6093 | 6334 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 22865 | 442 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 15967650 | 15967650 | PRJNA683669_P_NODE_16613_length_318_cov_1.110204_g16382_i0 | PRJNA683669 | 16613 | 318 | 1.110204 | 3.53044872 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 159 | 4.92e-45 | NR | AAP88974.1 | 5775 | g16382 | i0 | 81.3 | 0.858490566037736 | 91 | 17 | 85.8 | 0 | 275 | 3 | 4 | 94 | AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] | diamond | 273 | 159 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 22342233 | 22342233 | PRJNA683669_P_NODE_20558_length_285_cov_1.334906_g20326_i0 | PRJNA683669 | 20558 | 285 | 1.334906 | 3.8044821 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 448 | 2.8699999999999997e-121 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g20326 | i0 | 95.105 | 24.5719298245614 | 286 | 10 | 99 | 4 | 2 | 285 | 7047 | 6764 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 7003 | 448 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 27555857 | 27555857 | PRJNA683669_P_NODE_16884_length_315_cov_1.590909_g16653_i0 | PRJNA683669 | 16884 | 315 | 1.590909 | 5.01136335 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 183 | 2.28e-53 | NR | BAN33737.1 | 931554 | g16653 | i0 | 87.1 | 0.961904761904762 | 101 | 13 | 96.2 | 0 | 314 | 12 | 364 | 464 | BAN33737.1 elongation factor-like protein [Copromyxa protea] | diamond | 303 | 183 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;