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contig_metadata

14 rows where bioproject = "PRJNA682774" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA682774 · 14 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27745755 27745755 PRJNA682774_P_NODE_4864_length_245_cov_0.906977_g4835_i0 PRJNA682774 4864 245 0.906977 2.22209365 archaeon 1906665 Archaea Archaea 76.3 3.44e-14   NR RYY32083.1 1906665 g4835 i0 58.2 0.820408163265306 67 28 82 0 207 7 22 88 RYY32083.1 MAG: hypothetical protein EON62_05815 [archaeon] diamond 201 76.3 1 Archaea               archaeon
28124440 28124440 PRJNA682774_P_NODE_4565_length_247_cov_0.896552_g4536_i0 PRJNA682774 4565 247 0.896552 2.21448344 archaeon 1906665 Archaea Archaea 48.5 3.58e-4   NR RYH30714.1 1906665 g4536 i0 32.4 0.898785425101215 74 46 89.9 1 236 15 694 763 RYH30714.1 MAG: ankyrin repeat domain-containing protein [archaeon] diamond 222 48.5 1 Archaea               archaeon
28218883 28218883 PRJNA682774_P_NODE_2466_length_291_cov_1.431193_g2437_i0 PRJNA682774 2466 291 1.431193 4.16477163 Methanosarcinales archaeon 2250255 Archaea Archaea 110 7.62e-26   NR RYE85525.1 2250255 g2437 i0 55.1 0.917525773195876 89 39 90.7 1 2 265 600 688 RYE85525.1 MAG: hypothetical protein EOO65_00170 [Methanosarcinales archaeon] diamond 267 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28471832 28471832 PRJNA682774_P_NODE_4546_length_247_cov_0.896552_g4517_i0 PRJNA682774 4546 247 0.896552 2.21448344 archaeon 1906665 Archaea Archaea 78.6 6.33e-16   NR MDP2438443.1 1906665 g4517 i0 60.6 0.862348178137652 71 28 86.2 0 1 213 111 181 MDP2438443.1 50S ribosomal protein L13 [archaeon] diamond 213 78.6 1 Archaea               archaeon
28661240 28661240 PRJNA682774_P_NODE_2467_length_291_cov_1.408257_g2438_i0 PRJNA682774 2467 291 1.408257 4.09802787 archaeon 1906665 Archaea Archaea 152 1.04e-40   NR RYH27824.1 1906665 g2438 i0 74 0.989690721649485 96 25 99 0 2 289 479 574 RYH27824.1 MAG: acyl-CoA dehydrogenase [archaeon] diamond 288 152 1 Archaea               archaeon
29083349 29083349 PRJNA682774_P_NODE_5028_length_244_cov_0.912281_g4999_i0 PRJNA682774 5028 244 0.912281 2.22596564 root 1 Root_unresolved Root_unresolved 47.4 4.59e-5   NR MDT7870628.1 2268139 g4999 i0 52.5 2.77868852459016 40 19 49.2 0 120 1 3 42 MDT7870628.1 ankyrin repeat domain-containing protein [Thermoproteus sp.] diamond 678 47.8 0.99163179916318 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Thermoproteus Thermoproteus sp.
29766112 29766112 PRJNA682774_P_NODE_4151_length_249_cov_0.886364_g4122_i0 PRJNA682774 4151 249 0.886364 2.20704636 Nitrososphaerota archaeon 2026795 Archaea Archaea 157 2.57e-46   NR MCH8972713.1 2026795 g4122 i0 93.9 1.97590361445783 82 5 98.8 0 2 247 48 129 MCH8972713.1 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase [Nitrososphaerota archaeon] diamond 492 157 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30555866 30555866 PRJNA682774_P_NODE_4493_length_247_cov_0.896552_g4464_i0 PRJNA682774 4493 247 0.896552 2.21448344 archaeon 1906665 Archaea Archaea 124 3.3e-31   NR RYG67888.1 1906665 g4464 i0 71.6 0.983805668016194 81 23 98.4 0 2 244 106 186 RYG67888.1 MAG: hypothetical protein EON64_06465, partial [archaeon] diamond 243 124 1 Archaea               archaeon
30650613 30650613 PRJNA682774_P_NODE_3293_length_257_cov_1.418478_g3264_i0 PRJNA682774 3293 257 1.418478 3.64548846 archaeon 1906665 Archaea Archaea 96.3 2.0799999999999994e-23   NR RYG51853.1 1906665 g3264 i0 88.5 0.607003891050584 52 6 60.7 0 29 184 75 126 RYG51853.1 MAG: hypothetical protein EON67_02520 [archaeon] diamond 156 96.3 1 Archaea               archaeon
30903691 30903691 PRJNA682774_P_NODE_4474_length_247_cov_0.896552_g4445_i0 PRJNA682774 4474 247 0.896552 2.21448344 Thermoplasmatales archaeon SG8-52-4 1803819 Archaea Archaea 91.7 1.02e-19   NR KYK20734.1 1803819 g4445 i0 60.3 9.91093117408907 68 27 82.6 0 18 221 2 69 KYK20734.1 MAG: molecular chaperone DnaJ [Thermoplasmatales archaeon SG8-52-4] diamond 2448 91.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon SG8-52-4
31536090 31536090 PRJNA682774_P_NODE_3476_length_253_cov_0.866667_g3447_i0 PRJNA682774 3476 253 0.866667 2.19266751 Methanocorpusculum sp. 2058474 Archaea Archaea 48.9 2.72e-4   NR HJJ47081.1 2058474 g3447 i0 45.3 1.54150197628458 64 35 75.9 0 249 58 227 290 HJJ47081.1 Hsp70 family protein [Methanocorpusculum sp.] diamond 390 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
32168799 32168799 PRJNA682774_P_NODE_2838_length_275_cov_1.910891_g2809_i0 PRJNA682774 2838 275 1.910891 5.25495025 Methanobacteriota archaeon 2026739 Archaea Archaea 64.3 6.15e-10   NR RYE97637.1 2026739 g2809 i0 64.4 1.35272727272727 45 16 49.1 0 141 275 18 62 RYE97637.1 MAG: C1 family peptidase, partial [Methanobacteriota archaeon] diamond 372 64.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32232124 32232124 PRJNA682774_P_NODE_3458_length_253_cov_0.866667_g3429_i0 PRJNA682774 3458 253 0.866667 2.19266751 archaeon 1906665 Archaea Archaea 132 1.26e-35   NR RYH04926.1 1906665 g3429 i0 75.6 0.972332015810277 82 20 97.2 0 252 7 189 270 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 246 132 1 Archaea               archaeon
32516881 32516881 PRJNA682774_P_NODE_3859_length_251_cov_0.876404_g3830_i0 PRJNA682774 3859 251 0.876404 2.19977404 archaeon 1906665 Archaea Archaea 105 3.69e-27   NR RYH18874.1 1906665 g3830 i0 66.2 1.8406374501992 71 22 84.9 1 249 37 40 108 RYH18874.1 MAG: hypothetical protein EON65_26765 [archaeon] diamond 462 105 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;