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contig_metadata

10 rows where bioproject = "PRJNA682774" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA682774 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664628 664628 PRJNA682774_P_NODE_1721_length_339_cov_1.759398_g1692_i0 PRJNA682774 1721 339 1.759398 5.96435922 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 604 1.9599999999999993e-168   NTclustered gi|512134091|gb|KC575315.1| 175275 g1692 i0 98.82 100.330383480826 339 4 100 0 1 339 373 35 Uncultured cercozoan clone A.3.2 18S ribosomal RNA gene, partial sequence blastn 34012 604 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
7043295 7043295 PRJNA682774_P_NODE_1826_length_332_cov_0.903475_g1797_i0 PRJNA682774 1826 332 0.903475 2.999537 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 137 2.8399999999999997e-37   NR MES1907458.1 1215613 g1797 i0 64.4 2.91867469879518 104 37 94 0 313 2 6 109 MES1907458.1 hypothetical protein [Cercozoa sp. M6MM] diamond 969 137 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
8317780 8317780 PRJNA682774_P_NODE_107_length_1266_cov_2.662196_g89_i0 PRJNA682774 107 1266 2.662196 33.70340136 Cercozoa sp. DMV 1342330 SAR_Eukaryotes SAR_Eukaryotes 447 1.0599999999999999e-151   NR BAN37425.1 1342330 g89 i0 72.9 2.69905213270142 288 78 68.2 0 2 865 149 436 BAN37425.1 elongation factor 1-alpha [Cercozoa sp. DMV] diamond 3417 447 1 Eukaryota Sar   Cercozoa         Cercozoa sp. DMV
9593302 9593302 PRJNA682774_P_NODE_848_length_468_cov_0.987342_g819_i0 PRJNA682774 848 468 0.987342 4.62076056 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 171 9.6e-51   NR MES1916659.1 1215613 g819 i0 63 0.865384615384615 135 46 86.5 3 1 405 78 208 MES1916659.1 Ras-related protein Rab-7 [Cercozoa sp. M6MM] diamond 405 171 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
15967364 15967364 PRJNA682774_P_NODE_3213_length_260_cov_1.251337_g3184_i0 PRJNA682774 3213 260 1.251337 3.2534762 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 115 2.64e-30   NR MES1913311.1 1215613 g3184 i0 65.4 1.88076923076923 81 28 93.5 0 4 246 88 168 MES1913311.1 Actin-related protein 2/3 complex subunit 4 [Cercozoa sp. M6MM] diamond 489 115 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
17242572 17242572 PRJNA682774_P_NODE_2394_length_294_cov_3.208145_g2365_i0 PRJNA682774 2394 294 3.208145 9.4319463 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 377 3.96e-100   NTclustered gi|238617605|gb|FJ973380.1| 45107 g2365 i0 90.559 97.2925170068027 286 25 97 2 1 285 1191 1475 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 28604 377 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24890788 24890788 PRJNA682774_P_NODE_2500_length_289_cov_3.226852_g2471_i0 PRJNA682774 2500 289 3.226852 9.32560228 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 305 1.86e-78   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2471 i0 86.159 33.8477508650519 289 33 99 6 3 289 4009 3726 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 9782 305 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
26892497 26892497 PRJNA682774_P_NODE_1001_length_432_cov_1.518106_g972_i0 PRJNA682774 1001 432 1.518106 6.55821792 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 172 3.8e-52   NR AAT09077.1 227086 g972 i0 64.5 0.958333333333333 138 45 95.8 1 15 428 1 134 AAT09077.1 transcription factor BTF3 [Bigelowiella natans] diamond 414 172 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
29702700 29702700 PRJNA682774_P_NODE_2550_length_288_cov_0.990698_g2521_i0 PRJNA682774 2550 288 0.990698 2.85321024 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 159 2.0799999999999998e-46   NR ADK26624.1 323453 g2521 i0 79.8 0.979166666666667 94 19 97.9 0 287 6 133 226 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 282 159 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
29829353 29829353 PRJNA682774_P_NODE_3791_length_251_cov_0.876404_g3762_i0 PRJNA682774 3791 251 0.876404 2.19977404 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 63.5 1.81e-9   NR ACO54851.1 1561963 g3762 i0 61.1 0.645418326693227 54 21 64.5 0 1 162 318 371 ACO54851.1 calreticulin [Amorphochlora amoebiformis] diamond 162 63.5 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;