RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682774" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA682774 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29083349 29083349 PRJNA682774_P_NODE_5028_length_244_cov_0.912281_g4999_i0 PRJNA682774 5028 244 0.912281 2.22596564 root 1 Root_unresolved Root_unresolved 47.4 4.59e-5   NR MDT7870628.1 2268139 g4999 i0 52.5 2.77868852459016 40 19 49.2 0 120 1 3 42 MDT7870628.1 ankyrin repeat domain-containing protein [Thermoproteus sp.] diamond 678 47.8 0.99163179916318 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Thermoproteus Thermoproteus sp.
29766112 29766112 PRJNA682774_P_NODE_4151_length_249_cov_0.886364_g4122_i0 PRJNA682774 4151 249 0.886364 2.20704636 Nitrososphaerota archaeon 2026795 Archaea Archaea 157 2.57e-46   NR MCH8972713.1 2026795 g4122 i0 93.9 1.97590361445783 82 5 98.8 0 2 247 48 129 MCH8972713.1 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase [Nitrososphaerota archaeon] diamond 492 157 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;