RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA682774", tax_kingdom = "Metazoa" and tax_phylum = "Tardigrada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA682774 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27366879 27366879 PRJNA682774_P_NODE_4283_length_248_cov_0.891429_g4254_i0 PRJNA682774 4283 248 0.891429 2.21074392 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 73.2 7.7e-13   NR OQV23554.1 2072580 g4254 i0 46.8 0.931451612903226 77 41 93.1 0 4 234 636 712 OQV23554.1 Transcription elongation factor SPT5 [Hypsibius exemplaris] diamond 231 73.2 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
30315432 30315432 PRJNA682774_P_NODE_5332_length_242_cov_1.195266_g5303_i0 PRJNA682774 5332 242 1.195266 2.89254372 root 1 Root_unresolved Root_unresolved 97.8 4.3599999999999997e-23   NR OQV16395.1 2072580 g5303 i0 59.8 2.08264462809917 82 29 99.2 2 242 3 68 147 OQV16395.1 putative Acidic endochitinase SP2 [Hypsibius exemplaris] diamond 504 97.8 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;