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contig_metadata

19 rows where bioproject = "PRJNA682774" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 19 ✖

bioproject 1

  • PRJNA682774 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1174713 1174713 PRJNA682774_P_NODE_801_length_479_cov_2.229064_g772_i0 PRJNA682774 801 479 2.229064 10.67721656 Bryopsis 3128 Plants Plants 468 3.91e-127   NTclustered gi|969822372|gb|KT950953.1| 3129 g772 i0 84.914 98.8496868475992 464 68 97 2 17 479 617 155 Bryopsis maxima actin gene, partial cds blastn 47349 468 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis maxima
3215416 3215416 PRJNA682774_P_NODE_1003_length_432_cov_1.086351_g974_i0 PRJNA682774 1003 432 1.086351 4.69303632 Eukaryota 2759 Plants Plants 151 2.74e-43   NR KAG2491764.1 47281 g974 i0 66.4 8.29861111111111 119 39 82.6 1 2 358 75 192 KAG2491764.1 hypothetical protein HYH03_009925 [Edaphochlamys debaryana] diamond 3585 152 0.993421052631579 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
8317787 8317787 PRJNA682774_P_NODE_1767_length_335_cov_2.381679_g1738_i0 PRJNA682774 1767 335 2.381679 7.97862465 Scenedesmus sp. PABB 2909984 Plants Plants 82.4 1.33e-15   NR KAF8054880.1 2742167 g1738 i0 51.9 1.86268656716418 104 47 93.1 2 24 335 1 101 KAF8054880.1 ARSA1 [Scenedesmus sp. PABB004] diamond 624 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
8317817 8317817 PRJNA682774_P_NODE_4227_length_248_cov_2.142857_g4198_i0 PRJNA682774 4227 248 2.142857 5.31428536 Chlamydomonadales 3042 Plants Plants 148 3.41e-39   NR XP_001691785.2 3055 g4198 i0 84.1 8.89112903225806 82 13 99.2 0 247 2 235 316 XP_001691785.2 uncharacterized protein CHLRE_17g699100v5 [Chlamydomonas reinhardtii] diamond 2205 149 0.993288590604027 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10868624 10868624 PRJNA682774_P_NODE_1389_length_370_cov_1.575758_g1360_i0 PRJNA682774 1389 370 1.575758 5.8303046 Chlamydomonas reinhardtii 3055 Plants Plants 355 2.39e-93   NTclustered gi|5738230|gb|AF175385.1|AF175385 3055 g1360 i0 85.07 77.7594594594595 355 46 95 6 15 367 57 406 Chlamydomonas reinhardtii 60S ribosomal protein L10a mRNA, complete cds blastn 28771 355 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17752547 17752547 PRJNA682774_P_NODE_4354_length_248_cov_0.891429_g4325_i0 PRJNA682774 4354 248 0.891429 2.21074392 Eukaryota 2759 Plants Plants 457 4.07e-124   NTclustered gi|1714003650|gb|MN243923.1| 3079 g4325 i0 100 99.9354838709677 247 0 99 0 2 248 769 523 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 24784 457 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
23617541 23617541 PRJNA682774_P_NODE_3359_length_254_cov_2.585635_g3330_i0 PRJNA682774 3359 254 2.585635 6.5675129 Coccomyxa subellipsoidea 248742 Plants Plants 217 7.73e-52   NTclustered gi|545374848|ref|XM_005651606.1| 574566 g3330 i0 84.475 34.988188976378 219 34 86 0 4 222 271 53 Coccomyxa subellipsoidea C-169 ribosomal protein S26 component of cytosolic 80S ribosome and 40S small subunit mRNA blastn 8887 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
24126671 24126671 PRJNA682774_P_NODE_1339_length_377_cov_0.921053_g1310_i0 PRJNA682774 1339 377 0.921053 3.47236981 Chlamydomonadales 3042 Plants Plants 140 1.22e-39   NR KAF5836517.1 3046 g1310 i0 80.2 3.68435013262599 116 23 92.3 0 30 377 1 116 KAF5836517.1 ribosomal protein S27a component of cytosolic 80S ribosome and 40S small subunit [Dunaliella salina] diamond 1389 140 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
24890790 24890790 PRJNA682774_P_NODE_2640_length_284_cov_0.957346_g2611_i0 PRJNA682774 2640 284 0.957346 2.71886264 Monoraphidium neglectum 145388 Plants Plants 267 8.599999999999999e-67   NTclustered gi|926766867|ref|XM_014037032.1| 145388 g2611 i0 86.92 81.5387323943662 237 31 83 0 2 238 237 1 Monoraphidium neglectum Tubulin alpha-1 chain mRNA blastn 23157 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
27303530 27303530 PRJNA682774_P_NODE_4723_length_246_cov_0.901734_g4694_i0 PRJNA682774 4723 246 0.901734 2.21826564 Trebouxia sp. C 2796353 Plants Plants 55.5 1.29e-6   NR KAL0048818.1 2905655 g4694 i0 35.7 2.5609756097561 70 45 85.4 0 211 2 1719 1788 KAL0048818.1 hypothetical protein WJX82_011724 [Trebouxia sp. C0006] diamond 630 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006
27315185 27315185 PRJNA682774_P_NODE_3963_length_250_cov_0.881356_g3934_i0 PRJNA682774 3963 250 0.881356 2.20339 Eukaryota 2759 Plants Plants 52.4 1.66e-5   NR KAK9908934.1 248742 g3934 i0 40.5 2.964 74 32 88.8 1 234 13 314 375 KAK9908934.1 hypothetical protein WJX75_004938 [Coccomyxa subellipsoidea] diamond 741 52.8 0.992424242424242 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27694299 27694299 PRJNA682774_P_NODE_4804_length_245_cov_0.906977_g4775_i0 PRJNA682774 4804 245 0.906977 2.22209365 Chlamydomonadales 3042 Plants Plants 110 1.63e-29   NR XP_042927436.1 3055 g4775 i0 88.7 2.27755102040816 62 7 75.9 0 189 4 1 62 XP_042927436.1 uncharacterized protein CHLRE_02g105950v5 [Chlamydomonas reinhardtii] diamond 558 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
28136200 28136200 PRJNA682774_P_NODE_245_length_872_cov_8.782228_g220_i0 PRJNA682774 245 872 8.782228 76.58102816 Chlamydomonas 3052 Plants Plants 58.2 1.48e-5   NR KAG2423999.1 51695 g220 i0 39.2 1.32110091743119 125 62 42.3 5 818 450 6 118 KAG2423999.1 hypothetical protein HXX76_014825 [Chlamydomonas incerta] diamond 1152 58.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
30113650 30113650 PRJNA682774_P_NODE_3332_length_255_cov_1.714286_g3303_i0 PRJNA682774 3332 255 1.714286 4.3714293 Chlorella sorokiniana 3076 Plants Plants 128 1.01e-33   NR PRW33552.1 3076 g3303 i0 67.8 2.05882352941176 90 23 98.8 1 255 4 226 315 PRW33552.1 Fructose-1,6- cytosolic [Chlorella sorokiniana] diamond 525 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30156711 30156711 PRJNA682774_P_NODE_4712_length_246_cov_0.901734_g4683_i0 PRJNA682774 4712 246 0.901734 2.21826564 root 1 Root_unresolved Root_unresolved 52.8 1.2e-5   NR KAI3437560.1 3077 g4683 i0 37 5.5609756097561 81 46 96.3 3 237 1 609 686 KAI3437560.1 hypothetical protein D9Q98_000013 [Chlorella vulgaris] diamond 1368 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
31472774 31472774 PRJNA682774_P_NODE_3856_length_251_cov_0.876404_g3827_i0 PRJNA682774 3856 251 0.876404 2.19977404 Scenedesmus sp. PABB 2909984 Plants Plants 125 5.05e-32   NR KAF8063068.1 2742167 g3827 i0 73.5 1.9840637450199201 83 22 99.2 0 2 250 327 409 KAF8063068.1 hslO [Scenedesmus sp. PABB004] diamond 498 125 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
31705658 31705658 PRJNA682774_P_NODE_5517_length_235_cov_3.080247_g5488_i0 PRJNA682774 5517 235 3.080247 7.23858045 Chlamydomonadales 3042 Plants Plants 105 3.0400000000000004e-27   NR GIL66009.1 51714 g5488 i0 78.5 1.6595744680851101 65 14 83 0 39 233 1 65 GIL66009.1 hypothetical protein Vafri_19640, partial [Volvox africanus] diamond 390 106 0.990566037735849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
32831737 32831737 PRJNA682774_P_NODE_2080_length_313_cov_0.829167_g2051_i0 PRJNA682774 2080 313 0.829167 2.59529271 Scenedesmus sp. PABB 2909984 Plants Plants 87.4 1.79e-17   NR KAF8054880.1 2742167 g2051 i0 54 4.62939297124601 100 43 95.8 2 13 312 1 97 KAF8054880.1 ARSA1 [Scenedesmus sp. PABB004] diamond 1449 87.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
32906228 32906228 PRJNA682774_P_NODE_5240_length_243_cov_0.917647_g5211_i0 PRJNA682774 5240 243 0.917647 2.22988221 Chlamydomonadales 3042 Plants Plants 67 1.04e-10   NR KXZ41737.1 33097 g5211 i0 64 4.69135802469136 50 18 61.7 0 241 92 536 585 KXZ41737.1 BBS9 protein [Gonium pectorale] diamond 1140 67 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;