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contig_metadata

21 rows where bioproject = "PRJNA682774", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA682774 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664633 664633 PRJNA682774_P_NODE_2121_length_310_cov_1.147679_g2092_i0 PRJNA682774 2121 310 1.147679 3.5578049 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 163 8.919999999999999e-45   NR KAG2789316.1 29920 g2092 i0 78.4 61.1806451612903 102 22 98.7 0 3 308 228 329 KAG2789316.1 Heat shock protein A [Phytophthora cactorum] diamond 18966 164 0.99390243902439 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
664637 664637 PRJNA682774_P_NODE_2741_length_279_cov_1.509709_g2712_i0 PRJNA682774 2741 279 1.509709 4.21208811 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 134 2.8099999999999997e-35   NR KAF1317690.1 82926 g2712 i0 82.1 5.25806451612903 78 14 83.9 0 45 278 4 81 KAF1317690.1 Isocitrate dehydrogenase [nadp], mitochondrial, partial [Globisporangium splendens] diamond 1467 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
4492575 4492575 PRJNA682774_P_NODE_2504_length_289_cov_2.166667_g2475_i0 PRJNA682774 2504 289 2.166667 6.26166763 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 180 1.18e-40   NTclustered gi|669159439|ref|XM_008617060.1| 1156394 g2475 i0 78.246 48.9031141868512 285 58 98 4 4 286 451 169 Saprolegnia diclina VS20 60S ribosomal protein mRNA blastn 14133 180 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
14693623 14693623 PRJNA682774_P_NODE_4792_length_245_cov_0.906977_g4763_i0 PRJNA682774 4792 245 0.906977 2.22209365 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 106 1.22e-26   NR TMW69363.1 41045 g4763 i0 75 0.930612244897959 76 19 93.1 0 228 1 10 85 TMW69363.1 hypothetical protein Poli38472_001519 [Pythium oligandrum] diamond 228 106 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
17242555 17242555 PRJNA682774_P_NODE_1294_length_382_cov_2.012945_g1265_i0 PRJNA682774 1294 382 2.012945 7.6894499 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 194 2.66e-57   NR KAJ8576152.1 4785 g1265 i0 73.2 7.97905759162304 127 34 99.7 0 382 2 209 335 KAJ8576152.1 hypothetical protein ON010_g3057 [Phytophthora cinnamomi] diamond 3048 194 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
17242615 17242615 PRJNA682774_P_NODE_5154_length_243_cov_0.917647_g5125_i0 PRJNA682774 5154 243 0.917647 2.22988221 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 246 9.36e-61   NTclustered gi|813170664|ref|XM_012348698.1| 695850 g5125 i0 85.062 96.8395061728395 241 36 99 0 2 242 410 170 Saprolegnia parasitica CBS 223.65 tubulin alpha chain mRNA blastn 23532 246 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
19026450 19026450 PRJNA682774_P_NODE_4355_length_248_cov_0.891429_g4326_i0 PRJNA682774 4355 248 0.891429 2.21074392 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 117 2.24e-29   NR DAZ92625.1 4803 g4326 i0 62.2 12.8951612903226 82 31 99.2 0 248 3 82 163 DAZ92625.1 TPA: hypothetical protein N0F65_011891 [Lagenidium giganteum] diamond 3198 117 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
22852163 22852163 PRJNA682774_P_NODE_5178_length_243_cov_0.917647_g5149_i0 PRJNA682774 5178 243 0.917647 2.22988221 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 213 9.49e-51   NTclustered gi|156986897|gb|EU080062.1| 4788 g5149 i0 83.122 97.0452674897119 237 36 97 2 9 243 1707 1473 Phytophthora megasperma isolate PD_00017(P3136) heat shock protein 90 (HSP90) gene, partial cds blastn 23582 213 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megasperma
23617551 23617551 PRJNA682774_P_NODE_3819_length_251_cov_0.876404_g3790_i0 PRJNA682774 3819 251 0.876404 2.19977404 Phytophthora lilii 2077276 SAR_Eukaryotes SAR_Eukaryotes 112 2.97e-30   NR GMF20109.1 2077276 g3790 i0 62.7 1.9840637450199201 83 30 99.2 1 249 1 9 90 GMF20109.1 unnamed protein product [Phytophthora lilii] diamond 498 112 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii
26702111 26702111 PRJNA682774_P_NODE_1841_length_330_cov_1.509728_g1812_i0 PRJNA682774 1841 330 1.509728 4.9821024 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.027   NR XP_009825362.1 112090 g1812 i0 44.9 1.4 49 26 43.6 1 308 165 371 419 XP_009825362.1 hypothetical protein H257_03107 [Aphanomyces astaci] diamond 462 44.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
26777472 26777472 PRJNA682774_P_NODE_4401_length_247_cov_1.793103_g4372_i0 PRJNA682774 4401 247 1.793103 4.42896441 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 47.8 1.31e-4   NR KAF0739569.1 100861 g4372 i0 44.7 0.923076923076923 38 21 46.2 0 247 134 64 101 KAF0739569.1 hypothetical protein Ae201684_004750 [Aphanomyces euteiches] diamond 228 48.1 0.993762993762994 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27271774 27271774 PRJNA682774_P_NODE_4463_length_247_cov_0.896552_g4434_i0 PRJNA682774 4463 247 0.896552 2.21448344 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 59.7 4.03e-8   NR KAF0716620.1 120398 g4434 i0 38.9 1.09311740890688 90 36 86.2 2 214 2 1 90 KAF0716620.1 hypothetical protein As57867_002742 [Aphanomyces stellatus] diamond 270 59.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
27966470 27966470 PRJNA682774_P_NODE_4885_length_245_cov_0.906977_g4856_i0 PRJNA682774 4885 245 0.906977 2.22209365 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 83.6 1.33e-16   NR OQS02292.1 74557 g4856 i0 46.8 4.8 79 42 96.7 0 4 240 276 354 OQS02292.1 vacuolar proton translocating ATPase A subunit, partial [Thraustotheca clavata] diamond 1176 83.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28913503 28913503 PRJNA682774_P_NODE_1988_length_319_cov_0.955285_g1959_i0 PRJNA682774 1988 319 0.955285 3.04735915 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 50.8 1.32e-4   NR DBA00340.1 4803 g1959 i0 41.4 1.22257053291536 70 32 58.3 2 1 186 332 400 DBA00340.1 TPA: hypothetical protein N0F65_000525 [Lagenidium giganteum] diamond 390 50.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
29229717 29229717 PRJNA682774_P_NODE_3289_length_257_cov_1.695652_g3260_i0 PRJNA682774 3289 257 1.695652 4.35782564 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 54.3 2.74e-6   NR DBA00492.1 4803 g3260 i0 38.4 1.89105058365759 73 45 85.2 0 13 231 51 123 DBA00492.1 TPA: hypothetical protein N0F65_002735 [Lagenidium giganteum] diamond 486 54.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30271990 30271990 PRJNA682774_P_NODE_5032_length_244_cov_0.912281_g5003_i0 PRJNA682774 5032 244 0.912281 2.22596564 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 58.9 3.94e-8   NR KAH9089433.1 100861 g5003 i0 67.6 2.27459016393443 37 11 45.5 1 2 112 71 106 KAH9089433.1 hypothetical protein LEN26_019153 [Aphanomyces euteiches] diamond 555 58.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30504604 30504604 PRJNA682774_P_NODE_4713_length_246_cov_0.901734_g4684_i0 PRJNA682774 4713 246 0.901734 2.21826564 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 9.04e-25   NR TMW56563.1 41045 g4684 i0 74.3 8.03658536585366 74 19 90.2 0 24 245 567 640 TMW56563.1 hypothetical protein Poli38472_006573 [Pythium oligandrum] diamond 1977 107 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31346206 31346206 PRJNA682774_P_NODE_2716_length_280_cov_1.507246_g2687_i0 PRJNA682774 2716 280 1.507246 4.2202888 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00457   NR TYZ65373.1 1485010 g2687 i0 38.2 1.43571428571429 68 40 72.9 2 206 3 410 475 TYZ65373.1 hypothetical protein PybrP1_012697 [[Pythium] brassicae (nom. inval.)] diamond 402 45.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
32105261 32105261 PRJNA682774_P_NODE_5358_length_242_cov_0.923077_g5329_i0 PRJNA682774 5358 242 0.923077 2.23384634 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 157 1.55e-45   NR KAG9413282.1 112091 g5329 i0 95 0.991735537190083 80 4 99.2 0 2 241 210 289 KAG9413282.1 hypothetical protein AC1031_012498 [Aphanomyces cochlioides] diamond 240 157 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
32654111 32654111 PRJNA682774_P_NODE_5280_length_243_cov_0.917647_g5251_i0 PRJNA682774 5280 243 0.917647 2.22988221 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 99.4 4.52e-22   NR DAZ99860.1 4803 g5251 i0 64.9 4.75308641975309 77 27 95.1 0 241 11 2050 2126 DAZ99860.1 TPA: hypothetical protein N0F65_008603 [Lagenidium giganteum] diamond 1155 100 0.994 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32748855 32748855 PRJNA682774_P_NODE_2840_length_275_cov_1.544554_g2811_i0 PRJNA682774 2840 275 1.544554 4.2475235 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 123 2.15e-31   NR DAZ94790.1 4803 g2811 i0 71.4 10.8109090909091 77 22 84 0 3 233 294 370 DAZ94790.1 TPA: hypothetical protein N0F65_002403, partial [Lagenidium giganteum] diamond 2973 124 0.991935483870968 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;