RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA682774", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA682774 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19026430 19026430 PRJNA682774_P_NODE_1075_length_415_cov_1.862573_g1046_i0 PRJNA682774 1075 415 1.862573 7.72967795 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 166 4.62e-49   NR ETO16568.1 46433 g1046 i0 62.6 15.2096385542169 139 50 99 2 413 3 76 214 ETO16568.1 14-3-3-like protein [Reticulomyxa filosa] diamond 6312 166 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28850398 28850398 PRJNA682774_P_NODE_3408_length_253_cov_0.866667_g3379_i0 PRJNA682774 3408 253 0.866667 2.19266751 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 115 7.45e-28   NR ETO20365.1 46433 g3379 i0 62.8 0.924901185770751 78 29 92.5 0 6 239 510 587 ETO20365.1 hypothetical protein RFI_16851, partial [Reticulomyxa filosa] diamond 234 115 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31662226 31662226 PRJNA682774_P_NODE_4217_length_249_cov_0.886364_g4188_i0 PRJNA682774 4217 249 0.886364 2.20704636 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 54.3 3.4e-6   NR ETO23063.1 46433 g4188 i0 37.9 0.795180722891566 66 41 79.5 0 208 11 591 656 ETO23063.1 hypothetical protein RFI_14122, partial [Reticulomyxa filosa] diamond 198 54.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;