contig_metadata
13 rows where bioproject = "PRJNA682774" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3215471 | 3215471 | PRJNA682774_P_NODE_4863_length_245_cov_0.906977_g4834_i0 | PRJNA682774 | 4863 | 245 | 0.906977 | 2.22209365 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 159 | 1.27e-34 | NTclustered | gi|2108005054|gb|CP070772.1| | 2052180 | g4834 | i0 | 79.821 | 0.910204081632653 | 223 | 41 | 90 | 4 | 18 | 238 | 685773 | 685993 | MAG: Phycisphaerales bacterium isolate bin220 chromosome | blastn | 223 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 15967387 | 15967387 | PRJNA682774_P_NODE_4813_length_245_cov_0.906977_g4784_i0 | PRJNA682774 | 4813 | 245 | 0.906977 | 2.22209365 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2051367837|gb|CP072029.1| | 239935 | g4784 | i0 | 99.592 | 65.0897959183673 | 245 | 1 | 100 | 0 | 1 | 245 | 1577096 | 1577340 | Akkermansia muciniphila strain Akk1713 chromosome, complete genome | blastn | 15947 | 448 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 17242596 | 17242596 | PRJNA682774_P_NODE_4154_length_249_cov_0.886364_g4125_i0 | PRJNA682774 | 4154 | 249 | 0.886364 | 2.20704636 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2623926283|gb|CP137887.1| | 239935 | g4125 | i0 | 100 | 95.6746987951807 | 249 | 0 | 100 | 0 | 1 | 249 | 318517 | 318765 | Akkermansia muciniphila strain SDLYAKK5 chromosome, complete genome | blastn | 23823 | 460 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 27335164 | 27335164 | PRJNA682774_P_NODE_5263_length_243_cov_0.917647_g5234_i0 | PRJNA682774 | 5263 | 243 | 0.917647 | 2.22988221 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 73.9 | 2.33e-13 | NR | HWA10989.1 | 2006848 | g5234 | i0 | 51.3 | 0.987654320987654 | 80 | 28 | 97.5 | 2 | 237 | 1 | 168 | 237 | HWA10989.1 hypothetical protein [Opitutaceae bacterium] | diamond | 240 | 73.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 27631013 | 27631013 | PRJNA682774_P_NODE_1424_length_366_cov_1.993174_g1395_i0 | PRJNA682774 | 1424 | 366 | 1.993174 | 7.29501684 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 58.9 | 3.29e-7 | NR | MBO6102755.1 | 2026772 | g1395 | i0 | 50.9 | 1.59836065573771 | 57 | 28 | 46.7 | 0 | 147 | 317 | 1054 | 1110 | MBO6102755.1 hypothetical protein [Opitutales bacterium] | diamond | 585 | 58.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 27650926 | 27650926 | PRJNA682774_P_NODE_3864_length_251_cov_0.876404_g3835_i0 | PRJNA682774 | 3864 | 251 | 0.876404 | 2.19977404 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 95.5 | 4.500000000000001e-22 | NR | HCG27922.1 | 2053569 | g3835 | i0 | 98 | 0.597609561752988 | 50 | 1 | 59.8 | 0 | 251 | 102 | 177 | 226 | HCG27922.1 hypothetical protein [Lentisphaeria bacterium] | diamond | 150 | 95.5 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 27820452 | 27820452 | PRJNA682774_P_NODE_2944_length_270_cov_1.583756_g2915_i0 | PRJNA682774 | 2944 | 270 | 1.583756 | 4.2761412 | Bacteria | 2 | Bacteria | Bacteria | 103 | 2.13e-23 | NR | MBI3829501.1 | 2026780 | g2915 | i0 | 58.4 | 1.97777777777778 | 89 | 36 | 98.9 | 1 | 269 | 3 | 343 | 430 | MBI3829501.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Planctomycetota bacterium] | diamond | 534 | 103 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29260881 | 29260881 | PRJNA682774_P_NODE_4849_length_245_cov_0.906977_g4820_i0 | PRJNA682774 | 4849 | 245 | 0.906977 | 2.22209365 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 73.2 | 7.22e-13 | NR | RYD77759.1 | 2026800 | g4820 | i0 | 45.6 | 0.96734693877551 | 79 | 42 | 96.7 | 1 | 244 | 8 | 511 | 588 | RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] | diamond | 237 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30019116 | 30019116 | PRJNA682774_P_NODE_5011_length_244_cov_0.912281_g4982_i0 | PRJNA682774 | 5011 | 244 | 0.912281 | 2.22596564 | Roseimaritima multifibrata | 1930274 | Bacteria | Bacteria | 87.8 | 1.51e-18 | NR | WP_145352363.1 | 1930274 | g4982 | i0 | 66.7 | 3.13524590163934 | 57 | 19 | 70.1 | 0 | 66 | 236 | 49 | 105 | WP_145352363.1 metallophosphoesterase [Roseimaritima multifibrata] | diamond | 765 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Roseimaritima | Roseimaritima multifibrata | |
| 31800334 | 31800334 | PRJNA682774_P_NODE_5377_length_242_cov_0.923077_g5348_i0 | PRJNA682774 | 5377 | 242 | 0.923077 | 2.23384634 | PVC group | 1783257 | Bacteria | Bacteria | 65.9 | 2.46e-10 | NR | KPK77428.1 | 1703411 | g5348 | i0 | 76.3 | 10.3636363636364 | 38 | 9 | 47.1 | 0 | 1 | 114 | 364 | 401 | KPK77428.1 MAG: elongation factor Tu [Phycisphaerae bacterium SM23_30] | diamond | 2508 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium SM23_30 | ||||
| 32105260 | 32105260 | PRJNA682774_P_NODE_4638_length_246_cov_0.901734_g4609_i0 | PRJNA682774 | 4638 | 246 | 0.901734 | 2.21826564 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 160 | 1.9e-44 | NR | MCH7992811.1 | 2026780 | g4609 | i0 | 96.3 | 0.98780487804878 | 81 | 3 | 98.8 | 0 | 2 | 244 | 2 | 82 | MCH7992811.1 carbamoyltransferase [Planctomycetota bacterium] | diamond | 243 | 160 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32200271 | 32200271 | PRJNA682774_P_NODE_3438_length_253_cov_0.866667_g3409_i0 | PRJNA682774 | 3438 | 253 | 0.866667 | 2.19266751 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 45.1 | 0.00681 | NR | MBL9138679.1 | 2026801 | g3409 | i0 | 32.5 | 0.91304347826087 | 77 | 47 | 91.3 | 2 | 2 | 232 | 541 | 612 | MBL9138679.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 231 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32768667 | 32768667 | PRJNA682774_P_NODE_5160_length_243_cov_0.917647_g5131_i0 | PRJNA682774 | 5160 | 243 | 0.917647 | 2.22988221 | Planctomycetales bacterium | 2053591 | Bacteria | Bacteria | 142 | 2.5499999999999998e-40 | NR | MCA9216007.1 | 2053591 | g5131 | i0 | 85.2 | 2 | 81 | 11 | 98.8 | 1 | 3 | 242 | 107 | 187 | MCA9216007.1 hypothetical protein [Planctomycetales bacterium] | diamond | 486 | 142 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;