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contig_metadata

23 rows where bioproject = "PRJNA682774" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA682774 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1940644 1940644 PRJNA682774_P_NODE_4082_length_249_cov_0.886364_g4053_i0 PRJNA682774 4082 249 0.886364 2.20704636 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 86.7 4.27e-18   NR XP_012751920.1 1410327 g4053 i0 50.6 4.8433734939759 81 40 97.6 0 248 6 217 297 XP_012751920.1 hypothetical protein SAMD00019534_085750 [Acytostelium subglobosum LB1] diamond 1206 86.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
5768320 5768320 PRJNA682774_P_NODE_645_length_541_cov_1.198718_g616_i0 PRJNA682774 645 541 1.198718 6.48506438 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 176 1.9e-52   NR XP_004337603.1 1257118 g616 i0 65 0.77634011090573 140 46 77.6 1 429 10 74 210 XP_004337603.1 ribosomal protein L23, putative [Acanthamoeba castellanii str. Neff] diamond 420 176 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17242612 17242612 PRJNA682774_P_NODE_5034_length_244_cov_0.912281_g5005_i0 PRJNA682774 5034 244 0.912281 2.22596564 root 1 Root_unresolved Root_unresolved 125 3.3999999999999992e-31   NR KAH3767411.1 1580589 g5005 i0 71.3 11.8893442622951 80 23 98.4 0 244 5 141 220 KAH3767411.1 phosphoenolpyruvate carboxykinase [Pelomyxa schiedti] diamond 2901 125 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
17242624 17242624 PRJNA682774_P_NODE_894_length_456_cov_1.402089_g865_i0 PRJNA682774 894 456 1.402089 6.39352584 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 173 1.27e-48   NR XP_004334355.1 1257118 g865 i0 54.4 0.967105263157895 147 64 94.7 2 452 21 336 482 XP_004334355.1 protein disulfideisomerase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 441 173 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24126691 24126691 PRJNA682774_P_NODE_5439_length_242_cov_0.923077_g5410_i0 PRJNA682774 5439 242 0.923077 2.23384634 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 220 5.65e-53   NTclustered gi|433874|emb|X75263.1| 44689 g5410 i0 84.211 60.3057851239669 228 34 94 2 6 232 1346 1572 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70) blastn 14594 220 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27050590 27050590 PRJNA682774_P_NODE_3002_length_268_cov_1.235897_g2973_i0 PRJNA682774 3002 268 1.235897 3.31220396 Heterostelium album PN5 2086695 Evosea other_Eukaryota 52.8 1.53e-5   NR XP_020437930.1 670386 g2973 i0 44.6 1.53358208955224 65 31 67.2 2 187 8 644 708 XP_020437930.1 Ras guanine nucleotide exchange factor Q [Heterostelium album PN500] diamond 411 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27524499 27524499 PRJNA682774_P_NODE_4143_length_249_cov_0.886364_g4114_i0 PRJNA682774 4143 249 0.886364 2.20704636 Cavenderia fasciculata 261658 Evosea other_Eukaryota 60.1 3.24e-8   NR XP_004350516.1 261658 g4114 i0 41 1 83 46 96.4 2 7 246 746 828 XP_004350516.1 Phox domain-containing protein [Cavenderia fasciculata] diamond 249 60.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
27599497 27599497 PRJNA682774_P_NODE_4484_length_247_cov_0.896552_g4455_i0 PRJNA682774 4484 247 0.896552 2.21448344 Eumycetozoa 142796 Evosea other_Eukaryota 42.7 0.037   NR KAF2076809.1 133409 g4455 i0 51.7 0.704453441295547 29 14 35.2 0 1 87 272 300 KAF2076809.1 hypothetical protein CYY_001886 [Polysphondylium violaceum] diamond 174 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27946597 27946597 PRJNA682774_P_NODE_3665_length_252_cov_0.871508_g3636_i0 PRJNA682774 3665 252 0.871508 2.19620016 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.8 2.77e-16   NR KAH3756436.1 1580589 g3636 i0 53.7 2.39285714285714 67 31 79.8 0 202 2 252 318 KAH3756436.1 cell division cycle protein 123-like [Pelomyxa schiedti] diamond 603 83.2 0.995192307692308 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28977030 28977030 PRJNA682774_P_NODE_5468_length_242_cov_0.923077_g5439_i0 PRJNA682774 5468 242 0.923077 2.23384634 Cavenderia fasciculata 261658 Evosea other_Eukaryota 51.2 3.76e-5   NR XP_004354488.1 261658 g5439 i0 46.7 0.557851239669422 45 24 55.8 0 240 106 634 678 XP_004354488.1 uncharacterized protein DFA_10584 [Cavenderia fasciculata] diamond 135 51.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29103334 29103334 PRJNA682774_P_NODE_2828_length_276_cov_1.147783_g2799_i0 PRJNA682774 2828 276 1.147783 3.16788108 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 53.9 2.31e-6   NR XP_639361.1 352472 g2799 i0 41.3 1.52173913043478 75 43 80.4 1 52 273 33 107 XP_639361.1 hypothetical protein DDB_G0282853 [Dictyostelium discoideum AX4] diamond 420 53.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29387502 29387502 PRJNA682774_P_NODE_3389_length_253_cov_1.555556_g3360_i0 PRJNA682774 3389 253 1.555556 3.93555668 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 87 4.08e-19   NR KYQ99923.1 361077 g3360 i0 55.6 2.92885375494071 81 32 96 1 1 243 113 189 KYQ99923.1 Ras GTPase [Tieghemostelium lacteum] diamond 741 87 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29797711 29797711 PRJNA682774_P_NODE_4171_length_249_cov_0.886364_g4142_i0 PRJNA682774 4171 249 0.886364 2.20704636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 5.21e-25   NR XP_004367664.1 1257118 g4142 i0 53.1 1.93975903614458 81 38 97.6 0 247 5 118 198 XP_004367664.1 phytanoylCoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 483 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30050388 30050388 PRJNA682774_P_NODE_5431_length_242_cov_0.923077_g5402_i0 PRJNA682774 5431 242 0.923077 2.23384634 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 104 5.16e-24   NR XP_004332832.1 1257118 g5402 i0 64.6 1.97107438016529 79 28 97.9 0 3 239 469 547 XP_004332832.1 Prokumamolisin, putative [Acanthamoeba castellanii str. Neff] diamond 477 104 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30208233 30208233 PRJNA682774_P_NODE_532_length_596_cov_3.422562_g504_i0 PRJNA682774 532 596 3.422562 20.39846952 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 0.0196   NR XP_004334245.1 1257118 g504 i0 32.1 0.785234899328859 156 83 70 9 555 139 4 153 XP_004334245.1 uncharacterized protein ACA1_031140 [Acanthamoeba castellanii str. Neff] diamond 468 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30430055 30430055 PRJNA682774_P_NODE_1313_length_380_cov_1.420195_g1284_i0 PRJNA682774 1313 380 1.420195 5.396741 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 114 6.66e-29   NR PRP86688.1 1890364 g1284 i0 62.1 0.686842105263158 87 33 68.7 0 120 380 105 191 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 261 114 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30682233 30682233 PRJNA682774_P_NODE_3353_length_255_cov_0.939560_g3324_i0 PRJNA682774 3353 255 0.93956 2.395878 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 79.7 2.87e-15   NR KAH3760039.1 1580589 g3324 i0 50.7 0.858823529411765 73 34 85.9 1 255 37 207 277 KAH3760039.1 pectin acetylesterase [Pelomyxa schiedti] diamond 219 79.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31472773 31472773 PRJNA682774_P_NODE_2876_length_274_cov_1.447761_g2847_i0 PRJNA682774 2876 274 1.447761 3.96686514 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 52.8 1.61e-5   NR KAH3767025.1 1580589 g2847 i0 32.6 1.04014598540146 95 55 99.6 2 274 2 336 425 KAH3767025.1 peptidase S41 family protein [Pelomyxa schiedti] diamond 285 52.8 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31599293 31599293 PRJNA682774_P_NODE_3516_length_253_cov_0.866667_g3487_i0 PRJNA682774 3516 253 0.866667 2.19266751 Dictyostelium purpureum 5786 Evosea other_Eukaryota 64.3 8.87e-10   NR XP_003290610.1 5786 g3487 i0 43.1 1.51778656126482 65 34 73.5 1 190 5 20 84 XP_003290610.1 uncharacterized protein DICPUDRAFT_98747 [Dictyostelium purpureum] diamond 384 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32370254 32370254 PRJNA682774_P_NODE_4659_length_246_cov_0.901734_g4630_i0 PRJNA682774 4659 246 0.901734 2.21826564 Heterostelium 2058189 Evosea other_Eukaryota 73.6 5.36e-13   NR ABD62816.1 13642 g4630 i0 45.7 1.97560975609756 81 43 98.8 1 245 3 256 335 ABD62816.1 mitochondrial single-subunit RNA polymerase, partial [Heterostelium pallidum] diamond 486 73.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
32485172 32485172 PRJNA682774_P_NODE_2819_length_276_cov_1.502463_g2790_i0 PRJNA682774 2819 276 1.502463 4.14679788 Amoeba proteus 5775 Tubulinea other_Eukaryota 124 1.16e-31   NR AAD37351.1 5775 g2790 i0 68.1 0.989130434782609 91 29 98.9 0 2 274 91 181 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 273 124 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32548518 32548518 PRJNA682774_P_NODE_3639_length_252_cov_0.871508_g3610_i0 PRJNA682774 3639 252 0.871508 2.19620016 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 127 6.45e-34   NR XP_004342212.1 1257118 g3610 i0 65.1 0.988095238095238 83 29 98.8 0 250 2 62 144 XP_004342212.1 ubiquitin interaction motif domain containing protein [Acanthamoeba castellanii str. Neff] diamond 249 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32874792 32874792 PRJNA682774_P_NODE_5000_length_244_cov_0.912281_g4971_i0 PRJNA682774 5000 244 0.912281 2.22596564 Dictyosteliales 2058949 Evosea other_Eukaryota 97.8 1.6e-21   NR XP_003295153.1 5786 g4971 i0 53.8 7.84426229508197 80 37 98.4 0 4 243 560 639 XP_003295153.1 uncharacterized protein DICPUDRAFT_51917 [Dictyostelium purpureum] diamond 1914 97.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;