RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA682370", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA682370 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30788890 30788890 PRJNA682370_S_NODE_14394_length_189_cov_1.292208_g13782_i0 PRJNA682370 14394 189 1.292208 2.44227312 root 1 Root_unresolved Root_unresolved 44.3 0.00542   NR KAI3386522.1 104778 g13782 i0 39.5 2.15873015873016 43 26 68.3 0 49 177 739 781 KAI3386522.1 hypothetical protein SNEBB_006056 [Seison nebaliae] diamond 408 44.3 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae
31093186 31093186 PRJNA682370_S_NODE_7655_length_274_cov_2.347280_g7043_i0 PRJNA682370 7655 274 2.34728 6.4315472 Rotaria socialis 392032 Rotifera other_Eukaryota 127 1.42e-34   NR CAF4457482.1 392032 g7043 i0 65.9 6.04379562043796 91 31 99.6 0 274 2 129 219 CAF4457482.1 unnamed protein product, partial [Rotaria socialis] diamond 1656 127 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
31156035 31156035 PRJNA682370_S_NODE_22275_length_155_cov_1.491667_g21663_i0 PRJNA682370 22275 155 1.491667 2.31208385 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 52 5.77e-6   NR CAF0922068.1 1234261 g21663 i0 45.8 0.929032258064516 48 26 92.9 0 148 5 186 233 CAF0922068.1 unnamed protein product [Didymodactylos carnosus] diamond 144 52 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;