RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682370", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA682370 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12143706 12143706 PRJNA682370_S_NODE_2250_length_562_cov_3.988615_g1689_i0 PRJNA682370 2250 562 3.988615 22.4160163 Helobdella robusta 6412 Annelida Annelida 63.9 2.56e-5   NTclustered gi|675862479|ref|XM_009018552.1| 6412 g1689 i0 97.368 0.120996441281139 38 0 7 1 187 224 4010 4046 Helobdella robusta hypothetical protein partial mRNA blastn 68 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
15967008 15967008 PRJNA682370_S_NODE_19573_length_163_cov_1.859375_g18961_i0 PRJNA682370 19573 163 1.859375 3.03078125 Hirudo verbana 311461 Annelida Annelida 52.8 0.014   NTclustered gi|2918369718|emb|OZ237791.1| 311461 g18961 i0 96.875 0.196319018404908 32 0 19 1 34 64 8743979 8743948 Hirudo verbana genome assembly, chromosome: 13 blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;