RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682370", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA682370 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27176747 27176747 PRJNA682370_S_NODE_17862_length_170_cov_1.207407_g17250_i0 PRJNA682370 17862 170 1.207407 2.0525919 Blastocladiella britannica 64508 Fungi Fungi 58.5 2.58e-8   NR KAI9221479.1 64508 g17250 i0 56.9 5.36470588235294 51 22 90 0 153 1 40 90 KAI9221479.1 40S ribosomal protein S1 [Blastocladiella britannica] diamond 912 58.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31599277 31599277 PRJNA682370_S_NODE_13156_length_198_cov_1.251534_g12544_i0 PRJNA682370 13156 198 1.251534 2.47803732 Coelomomyces lativittatus 945690 Fungi Fungi 79.7 9.91e-18   NR KAJ1500436.1 945690 g12544 i0 69.2 2.83333333333333 65 20 98.5 0 3 197 10 74 KAJ1500436.1 Ca(2+)-dependent cysteine protease [Coelomomyces lativittatus] diamond 561 79.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;