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contig_metadata

32 rows where bioproject = "PRJNA682370" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA682370 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3215156 3215156 PRJNA682370_S_NODE_24103_length_151_cov_1.198276_g23491_i0 PRJNA682370 24103 151 1.198276 1.80939676 Nolandella sp. ATCC PRA-27 498006 Tubulinea other_Eukaryota 99 1.56e-16   NTclustered gi|167859744|gb|EU273453.1| 498006 g23491 i0 84.158 4.8476821192053 101 16 67 0 1 101 663 563 Nolandella sp. ATCC PRA-27 clone 2 actin gene, partial cds blastn 732 99 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Nolandella Nolandella sp. ATCC PRA-27
4492555 4492555 PRJNA682370_S_NODE_9684_length_236_cov_2.258706_g9072_i0 PRJNA682370 9684 236 2.258706 5.33054616 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 226 1.18e-54   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g9072 i0 84.188 38.6228813559322 234 35 99 2 1 233 2390 2158 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 9115 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10868290 10868290 PRJNA682370_S_NODE_19269_length_164_cov_1.976744_g18657_i0 PRJNA682370 19269 164 1.976744 3.24186016 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|111226590|ref|XM_636082.2| 352472 g18657 i0 96.875 0.365853658536585 32 1 20 0 76 107 386 417 Dictyostelium discoideum AX4 Ras GTPase (DDB_G0280437) mRNA, complete cds blastn 60 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
17242272 17242272 PRJNA682370_S_NODE_22234_length_155_cov_1.725000_g21622_i0 PRJNA682370 22234 155 1.725 2.67375 Acytostelium subglobosum 361139 Evosea other_Eukaryota 135 1.23e-27   NTclustered gi|831754058|ref|XM_012892546.1| 1410327 g21622 i0 82.895 3.4258064516129 152 24 97 2 1 151 640 490 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 531 135 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
20301120 20301120 PRJNA682370_S_NODE_4456_length_381_cov_2.341040_g3845_i0 PRJNA682370 4456 381 2.34104 8.9193624 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 132 5.33e-33   NR KAH3761749.1 1580589 g3845 i0 52.3 1.00787401574803 128 59 99.2 1 379 2 468 595 KAH3761749.1 gelation factor [Pelomyxa schiedti] diamond 384 132 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
21066565 21066565 PRJNA682370_S_NODE_10597_length_224_cov_1.825397_g9985_i0 PRJNA682370 10597 224 1.825397 4.08888928 Heterostelium album 2086695 Evosea other_Eukaryota 244 3.0599999999999997e-60   NTclustered gi|1160551744|ref|XM_020571206.1| 670386 g9985 i0 86.667 92.5446428571429 225 24 99 6 3 224 1805 2026 Polysphondylium pallidum PN500 heat shock protein (hspB), partial mRNA blastn 20730 244 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
23617161 23617161 PRJNA682370_S_NODE_18599_length_167_cov_1.189394_g17987_i0 PRJNA682370 18599 167 1.189394 1.98628798 Heterostelium album PN5 2086695 Evosea other_Eukaryota 90.1 2.7e-19   NR XP_020432601.1 670386 g17987 i0 72.7 1.97604790419162 55 15 98.8 0 165 1 94 148 XP_020432601.1 major vault protein [Heterostelium album PN500] diamond 330 90.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
24890438 24890438 PRJNA682370_S_NODE_19340_length_164_cov_1.488372_g18728_i0 PRJNA682370 19340 164 1.488372 2.44093008 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 67 3.49e-11   NR KYQ90277.1 361077 g18728 i0 57.4 7.73780487804878 47 20 86 0 164 24 567 613 KYQ90277.1 myosin II heavy chain [Tieghemostelium lacteum] diamond 1269 67 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27144916 27144916 PRJNA682370_S_NODE_12422_length_204_cov_2.508876_g11810_i0 PRJNA682370 12422 204 2.508876 5.11810704 Heterostelium album PN5 2086695 Evosea other_Eukaryota 48.9 1.24e-4   NR XP_020433716.1 670386 g11810 i0 35.3 1 68 43 98.5 1 2 202 136 203 XP_020433716.1 component of the counting factor complex [Heterostelium album PN500] diamond 204 48.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27398327 27398327 PRJNA682370_S_NODE_4623_length_373_cov_2.855030_g4011_i0 PRJNA682370 4623 373 2.85503 10.6492619 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 150 9.05e-44   NR KYR02504.1 361077 g4011 i0 55.6 1.99463806970509 124 55 99.7 0 1 372 13 136 KYR02504.1 actin binding protein [Tieghemostelium lacteum] diamond 744 150 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27410072 27410072 PRJNA682370_S_NODE_10143_length_230_cov_1.282051_g9531_i0 PRJNA682370 10143 230 1.282051 2.9487173 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82 1.03e-16   NR AFX73093.1 5778 g9531 i0 53.9 1.98260869565217 76 22 99.1 1 2 229 35 97 AFX73093.1 elongation factor 2 alpha, partial [Vermamoeba vermiformis] diamond 456 82.8 0.990338164251208 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
27840011 27840011 PRJNA682370_S_NODE_16424_length_177_cov_1.112676_g15812_i0 PRJNA682370 16424 177 1.112676 1.96943652 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.5 1.28e-12   NR XP_004341414.1 1257118 g15812 i0 61.1 0.915254237288136 54 20 91.5 1 3 164 77 129 XP_004341414.1 Factin-capping protein subunit alpha-2, putative [Acanthamoeba castellanii str. Neff] diamond 162 70.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28029773 28029773 PRJNA682370_S_NODE_17305_length_172_cov_1.751825_g16693_i0 PRJNA682370 17305 172 1.751825 3.013139 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84.7 6.49e-20   NR XP_004336976.1 1257118 g16693 i0 77.2 0.994186046511628 57 13 99.4 0 2 172 9 65 XP_004336976.1 major vault protein [Acanthamoeba castellanii str. Neff] diamond 171 84.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28072801 28072801 PRJNA682370_S_NODE_12985_length_199_cov_1.902439_g12373_i0 PRJNA682370 12985 199 1.902439 3.78585361 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.5 1.06e-15   NR PRP89367.1 1890364 g12373 i0 57.4 3.01507537688442 68 27 99.5 1 1 198 534 601 PRP89367.1 myosin II heavy chain [Planoprotostelium fungivorum] diamond 600 80.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28124435 28124435 PRJNA682370_S_NODE_6125_length_316_cov_1.871886_g5513_i0 PRJNA682370 6125 316 1.871886 5.91515976 Polysphondylium violaceum 133409 Evosea other_Eukaryota 54.7 1.62e-6   NR KAF2078217.1 133409 g5513 i0 47.1 0.930379746835443 51 24 45.6 1 312 169 51 101 KAF2078217.1 hypothetical protein CYY_000507 [Polysphondylium violaceum] diamond 294 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28345377 28345377 PRJNA682370_S_NODE_11746_length_211_cov_2.460227_g11134_i0 PRJNA682370 11746 211 2.460227 5.19107897 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.8 3.52e-11   NR XP_004341947.1 1257118 g11134 i0 53.5 1.00947867298578 71 31 98.1 1 3 209 234 304 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 213 67.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28356931 28356931 PRJNA682370_S_NODE_15586_length_181_cov_1.650685_g14974_i0 PRJNA682370 15586 181 1.650685 2.98773985 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.4 0.00185   NR XP_001737935.1 370354 g14974 i0 33.3 2.95027624309392 48 32 79.6 0 159 16 462 509 XP_001737935.1 uncharacterized protein EDI_307930, partial [Entamoeba dispar SAW760] diamond 534 45.8 0.991266375545852 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
28356932 28356932 PRJNA682370_S_NODE_20606_length_160_cov_1.280000_g19994_i0 PRJNA682370 20606 160 1.28 2.048 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.2 3.93e-11   NR XP_004363125.1 261658 g19994 i0 66 7.6875 50 17 93.8 0 150 1 125 174 XP_004363125.1 S60 ribosomal protein L18 [Cavenderia fasciculata] diamond 1230 66.6 0.993993993993994 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28440258 28440258 PRJNA682370_S_NODE_13946_length_192_cov_1.662420_g13334_i0 PRJNA682370 13946 192 1.66242 3.1918464 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.4 2.94e-19   NR XP_004349741.1 1257118 g13334 i0 61.9 1.96875 63 24 98.4 0 3 191 58 120 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 378 87.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28755858 28755858 PRJNA682370_S_NODE_21267_length_158_cov_1.284553_g20655_i0 PRJNA682370 21267 158 1.284553 2.02959374 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47.8 2e-4   NR KAH3767783.1 1580589 g20655 i0 48.9 1.76582278481013 47 24 89.2 0 17 157 60 106 KAH3767783.1 GTPase-activating protein gyp7 [Pelomyxa schiedti] diamond 279 47.8 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28830536 28830536 PRJNA682370_S_NODE_15608_length_181_cov_1.452055_g14996_i0 PRJNA682370 15608 181 1.452055 2.62821955 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.3 1.76e-18   NR XP_003287403.1 5786 g14996 i0 70 5.96685082872928 60 18 99.4 0 1 180 102 161 XP_003287403.1 uncharacterized protein DICPUDRAFT_97694 [Dictyostelium purpureum] diamond 1080 86.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29178125 29178125 PRJNA682370_S_NODE_13229_length_197_cov_1.864198_g12617_i0 PRJNA682370 13229 197 1.864198 3.67247006 Dictyosteliaceae 2058185 Evosea other_Eukaryota 90.9 2.23e-19   NR KAF2068463.1 133409 g12617 i0 71.9 4.87309644670051 64 18 97.5 0 193 2 561 624 KAF2068463.1 hypothetical protein CYY_010210 [Polysphondylium violaceum] diamond 960 91.3 0.995618838992333 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29292598 29292598 PRJNA682370_S_NODE_8489_length_257_cov_3.648649_g7877_i0 PRJNA682370 8489 257 3.648649 9.37702793 Dictyostelium purpureum 5786 Evosea other_Eukaryota 71.2 4.08e-12   NR XP_003284481.1 5786 g7877 i0 50 0.863813229571984 74 34 86.4 2 255 34 512 582 XP_003284481.1 uncharacterized protein DICPUDRAFT_91322 [Dictyostelium purpureum] diamond 222 71.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29324124 29324124 PRJNA682370_S_NODE_4049_length_403_cov_2.461957_g3438_i0 PRJNA682370 4049 403 2.461957 9.92168671 Heterostelium album PN5 2086695 Evosea other_Eukaryota 111 3.94e-27   NR XP_020433716.1 670386 g3438 i0 54.7 0.707196029776675 95 40 70.7 1 116 400 49 140 XP_020433716.1 component of the counting factor complex [Heterostelium album PN500] diamond 285 111 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
29355892 29355892 PRJNA682370_S_NODE_8989_length_248_cov_1.685446_g8377_i0 PRJNA682370 8989 248 1.685446 4.17990608 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.1 0.0282   NR XP_004338989.1 1257118 g8377 i0 39.7 0.762096774193548 63 32 69 1 247 77 373 435 XP_004338989.1 encystationmediating serine proteinase [Acanthamoeba castellanii str. Neff] diamond 189 43.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29892760 29892760 PRJNA682370_S_NODE_16591_length_176_cov_1.198582_g15979_i0 PRJNA682370 16591 176 1.198582 2.10950432 Dictyostelium discoideum 44689 Evosea other_Eukaryota 75.1 5.58e-14   NR CAA43707.1 44689 g15979 i0 61.4 1.96022727272727 57 22 97.2 0 176 6 354 410 CAA43707.1 coronin [Dictyostelium discoideum] diamond 345 75.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30555850 30555850 PRJNA682370_S_NODE_11193_length_217_cov_1.609890_g10581_i0 PRJNA682370 11193 217 1.60989 3.4934613 Dictyostelium purpureum 5786 Evosea other_Eukaryota 45.1 0.00396   NR XP_003292234.1 5786 g10581 i0 45.5 0.76036866359447 55 27 76 1 1 165 278 329 XP_003292234.1 uncharacterized protein DICPUDRAFT_50286 [Dictyostelium purpureum] diamond 165 45.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30725609 30725609 PRJNA682370_S_NODE_11034_length_219_cov_1.521739_g10422_i0 PRJNA682370 11034 219 1.521739 3.33260841 Dictyosteliaceae 2058185 Evosea other_Eukaryota 53.9 2.98e-6   NR KAF2076912.1 133409 g10422 i0 38.4 5.34246575342466 73 42 100 1 219 1 246 315 KAF2076912.1 hypothetical protein CYY_001815 [Polysphondylium violaceum] diamond 1170 54.3 0.992633517495396 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31852052 31852052 PRJNA682370_S_NODE_16517_length_176_cov_1.843972_g15905_i0 PRJNA682370 16517 176 1.843972 3.24539072 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 74.7 3.53e-15   NR XP_638746.1 352472 g15905 i0 58.6 3.92045454545455 58 24 98.9 0 174 1 33 90 XP_638746.1 40S ribosomal protein S16 [Dictyostelium discoideum AX4] diamond 690 74.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32516876 32516876 PRJNA682370_S_NODE_9619_length_237_cov_1.915842_g9007_i0 PRJNA682370 9619 237 1.915842 4.54054554 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 65.5 3.33e-10   NR XP_004182963.1 370355 g9007 i0 45.8 1.86075949367089 72 36 88.6 2 235 26 778 848 XP_004182963.1 Gelation factor, putative [Entamoeba invadens IP1] diamond 441 65.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
32528476 32528476 PRJNA682370_S_NODE_15899_length_179_cov_2.076389_g15287_i0 PRJNA682370 15899 179 2.076389 3.71673631 Eumycetozoa 142796 Evosea other_Eukaryota 81.6 3.06e-16   NR XP_003284481.1 5786 g15287 i0 69.2 4.44134078212291 52 16 87.2 0 23 178 11 62 XP_003284481.1 uncharacterized protein DICPUDRAFT_91322 [Dictyostelium purpureum] diamond 795 82 0.995121951219512 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32811818 32811818 PRJNA682370_S_NODE_2940_length_481_cov_3.571749_g2342_i0 PRJNA682370 2940 481 3.571749 17.18011269 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 204 1.27e-64   NR XP_640149.1 352472 g2342 i0 65.6 6.65488565488566 154 51 95.4 2 2 460 3 155 XP_640149.1 40S ribosomal protein S11 [Dictyostelium discoideum AX4] diamond 3201 204 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;