RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682078", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA682078 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2449334 2449334 PRJNA682078_P_NODE_6082_length_1493_cov_2.401408_g5073_i0 PRJNA682078 6082 1493 2.401408 35.85302144 root 1 Root_unresolved Root_unresolved 2736 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g5073 i0 99.732 100.210984594776 1493 4 100 0 1 1493 1725 3217 Unidentified adenovirus strain CHOP Ad5 blastn 149615 2736 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
28913471 28913471 PRJNA682078_P_NODE_68868_length_416_cov_1.093294_g67093_i0 PRJNA682078 68868 416 1.093294 4.54810304 Pimephales minnow adintovirus 2609864 Viruses Viruses 73.6 1.52e-12   NR DAC81404.1 2609864 g67093 i0 34.9 0.930288461538462 129 83 92.3 1 409 26 111 239 DAC81404.1 TPA_asm: hypothetical protein [Pimephales minnow adintovirus] diamond 387 73.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;