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contig_metadata

35 rows where bioproject = "PRJNA682078" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 35 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682078 · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
663438 663438 PRJNA682078_P_NODE_70441_length_411_cov_2.514793_g68666_i0 PRJNA682078 70441 411 2.514793 10.33579923 Plectonchus hunti 345504 Nematoda Nematoda 132 4.93e-26   NTclustered gi|76560675|gb|DQ145700.1| 345504 g68666 i0 85.156 22.7445255474453 128 19 31 0 131 258 138 265 Plectonchus hunti 28S ribosomal RNA gene, partial sequence blastn 9348 132 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Plectonchus Plectonchus hunti
8313086 8313086 PRJNA682078_P_NODE_196967_length_265_cov_1.104167_g195190_i0 PRJNA682078 196967 265 1.104167 2.92604255 Teladorsagia circumcincta 45464 Nematoda Nematoda 71.2 4.37e-12   NR PIO76368.1 45464 g195190 i0 56.3 4.52830188679245 64 28 72.5 0 4 195 346 409 PIO76368.1 hypothetical protein TELCIR_01570 [Teladorsagia circumcincta] diamond 1200 71.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Teladorsagia Teladorsagia circumcincta
26733518 26733518 PRJNA682078_P_NODE_260541_length_245_cov_1.593023_g258764_i0 PRJNA682078 260541 245 1.593023 3.90290635 Heterodera trifolii 157864 Nematoda Nematoda 43.5 0.021   NR KAL3075849.1 157864 g258764 i0 38.5 0.636734693877551 52 29 63.7 1 90 245 242 290 KAL3075849.1 hypothetical protein niasHT_032052 [Heterodera trifolii] diamond 156 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
26935527 26935527 PRJNA682078_P_NODE_157662_length_288_cov_2.646512_g155885_i0 PRJNA682078 157662 288 2.646512 7.62195456 Rhabditida 6236 Nematoda Nematoda 49.7 2.37e-4   NR XP_045099682.1 6238 g155885 i0 37 4.11458333333333 81 44 84.4 1 243 1 152 225 XP_045099682.1 Protein CBG27950 [Caenorhabditis briggsae] diamond 1185 50.1 0.992015968063872 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
26955372 26955372 PRJNA682078_P_NODE_277362_length_243_cov_0.905882_g275585_i0 PRJNA682078 277362 243 0.905882 2.20129326 Ancylostoma ceylanicum 53326 Nematoda Nematoda 71.2 3.39e-12   NR EYB87952.1 53326 g275585 i0 54 0.777777777777778 63 29 77.8 0 45 233 370 432 EYB87952.1 hypothetical protein Y032_0254g286 [Ancylostoma ceylanicum] diamond 189 71.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
27619272 27619272 PRJNA682078_P_NODE_243384_length_248_cov_0.880000_g241607_i0 PRJNA682078 243384 248 0.88 2.1824 Necator americanus 51031 Nematoda Nematoda 53.1 7.07e-6   NR XP_064062325.1 51031 g241607 i0 34.6 3.7741935483871 78 35 75 1 241 56 143 220 XP_064062325.1 hypothetical protein RB195_015640 [Necator americanus] diamond 936 53.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
27694287 27694287 PRJNA682078_P_NODE_186864_length_271_cov_1.010101_g185087_i0 PRJNA682078 186864 271 1.010101 2.73737371 Trichostrongylidae 6315 Nematoda Nematoda 68.6 5.34e-12   NR XGW22264.1 6289 g185087 i0 85.3 5.6457564575645804 34 5 37.6 0 166 267 73 106 XGW22264.1 hypothetical protein V3C99_004908, partial [Haemonchus contortus] diamond 1530 68.9 0.995645863570392 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
27871698 27871698 PRJNA682078_P_NODE_204405_length_260_cov_1.844920_g202628_i0 PRJNA682078 204405 260 1.84492 4.796792 Caenorhabditis briggsae 6238 Nematoda Nematoda 117 3.5399999999999992e-31   NR XP_045098571.1 6238 g202628 i0 66.7 9.24230769230769 75 25 86.5 0 32 256 57 131 XP_045098571.1 Protein CBG27374 [Caenorhabditis briggsae] diamond 2403 117 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
28187285 28187285 PRJNA682078_P_NODE_43286_length_520_cov_1.393736_g41526_i0 PRJNA682078 43286 520 1.393736 7.2474272 Ancylostoma ceylanicum 53326 Nematoda Nematoda 96.7 4.78e-21   NR EYC14419.1 53326 g41526 i0 47.4 3.28846153846154 95 46 52.5 1 1 273 142 236 EYC14419.1 hypothetical protein Y032_0040g191 [Ancylostoma ceylanicum] diamond 1710 96.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
28187292 28187292 PRJNA682078_P_NODE_77966_length_392_cov_3.260188_g76191_i0 PRJNA682078 77966 392 3.260188 12.77993696 Angiostrongylus cantonensis 6313 Nematoda Nematoda 265 7.919999999999997e-88   NR KAE9412359.1 6313 g76191 i0 100 0.994897959183674 130 0 99.5 0 1 390 11 140 KAE9412359.1 hypothetical protein Angca_007934, partial [Angiostrongylus cantonensis] diamond 390 265 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
28345311 28345311 PRJNA682078_P_NODE_158926_length_288_cov_1.065116_g157149_i0 PRJNA682078 158926 288 1.065116 3.06753408 Haemonchus contortus 6289 Nematoda Nematoda 87.8 9.18e-18   NR XGW17004.1 6289 g157149 i0 43.2 0.989583333333333 95 54 99 0 3 287 436 530 XGW17004.1 hypothetical protein V3C99_001991 [Haemonchus contortus] diamond 285 87.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
28724262 28724262 PRJNA682078_P_NODE_15567_length_873_cov_2.738750_g14110_i0 PRJNA682078 15567 873 2.73875 23.9092875 Nippostrongylus brasiliensis 27835 Nematoda Nematoda 116 2.47e-26   NR VDL71189.1 27835 g14110 i0 33 0.625429553264605 182 122 62.5 0 773 228 139 320 VDL71189.1 unnamed protein product [Nippostrongylus brasiliensis] diamond 546 116 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis
29020383 29020383 PRJNA682078_P_NODE_253388_length_246_cov_1.780347_g251611_i0 PRJNA682078 253388 246 1.780347 4.37965362 Trichostrongylidae 6315 Nematoda Nematoda 83.2 5.9e-18   NR XGW26580.1 6289 g251611 i0 65.5 5.54878048780488 58 20 70.7 0 175 2 1 58 XGW26580.1 hypothetical protein V3C99_007301, partial [Haemonchus contortus] diamond 1365 83.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
29020386 29020386 PRJNA682078_P_NODE_266128_length_245_cov_0.860465_g264351_i0 PRJNA682078 266128 245 0.860465 2.10813925 Rhabditida 6236 Nematoda Nematoda 53.5 4.45e-6   NR KAK6059454.1 27828 g264351 i0 55.8 3.79591836734694 52 23 63.7 0 160 5 90 141 KAK6059454.1 hypothetical protein COOONC_02918 [Cooperia oncophora] diamond 930 53.9 0.992578849721707 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
29083342 29083342 PRJNA682078_P_NODE_280328_length_242_cov_1.692308_g278551_i0 PRJNA682078 280328 242 1.692308 4.09538536 Rhabditida 6236 Nematoda Nematoda 68.2 3e-11   NR XGW04337.1 6289 g278551 i0 65.9 1.66115702479339 44 15 54.5 0 238 107 246 289 XGW04337.1 hypothetical protein V3C99_015474 [Haemonchus contortus] diamond 402 68.6 0.994169096209913 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
29103318 29103318 PRJNA682078_P_NODE_69368_length_414_cov_2.384164_g67593_i0 PRJNA682078 69368 414 2.384164 9.87043896 Cooperia oncophora 27828 Nematoda Nematoda 228 1.1e-70   NR KAK6048272.1 27828 g67593 i0 84 0.949275362318841 131 21 94.9 0 412 20 91 221 KAK6048272.1 hypothetical protein COOONC_14223 [Cooperia oncophora] diamond 393 228 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
29229684 29229684 PRJNA682078_P_NODE_293569_length_239_cov_2.548193_g291792_i0 PRJNA682078 293569 239 2.548193 6.09018127 Ancylostoma caninum 29170 Nematoda Nematoda 68.6 4.5e-12   NR RCN38047.1 29170 g291792 i0 46.8 2.34728033472803 62 33 77.8 0 234 49 58 119 RCN38047.1 hypothetical protein ANCCAN_16036 [Ancylostoma caninum] diamond 561 68.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
29576522 29576522 PRJNA682078_P_NODE_248910_length_247_cov_0.885057_g247133_i0 PRJNA682078 248910 247 0.885057 2.18609079 Cooperia oncophora 27828 Nematoda Nematoda 53.1 2.2e-6   NR KAK6060131.1 27828 g247133 i0 63.2 0.461538461538462 38 14 46.2 0 2 115 69 106 KAK6060131.1 hypothetical protein COOONC_02217 [Cooperia oncophora] diamond 114 53.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
29576537 29576537 PRJNA682078_P_NODE_56910_length_455_cov_1.329843_g55137_i0 PRJNA682078 56910 455 1.329843 6.05078565 Caenorhabditis sp. 36 PRJEB53466 2970133 Nematoda Nematoda 49.3 0.00144   NR CAI2355841.1 2970133 g55137 i0 67.7 0.204395604395604 31 10 20.4 0 398 306 312 342 CAI2355841.1 unnamed protein product [Caenorhabditis sp. 36 PRJEB53466] diamond 93 49.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis sp. 36 PRJEB53466
29777770 29777770 PRJNA682078_P_NODE_231091_length_250_cov_0.870056_g229314_i0 PRJNA682078 231091 250 0.870056 2.17514 Metazoa 33208 Nematoda Nematoda 114 3.73e-27   NR XP_045098651.1 6238 g229314 i0 60.2 8.94 83 33 99.6 0 250 2 978 1060 XP_045098651.1 Protein CBG28064 [Caenorhabditis briggsae] diamond 2235 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
30030672 30030672 PRJNA682078_P_NODE_288771_length_241_cov_0.916667_g286994_i0 PRJNA682078 288771 241 0.916667 2.20916747 Metazoa 33208 Nematoda Nematoda 103 1.26e-25   NR XP_064064683.1 51031 g286994 i0 70.3 6.49792531120332 74 22 92.1 0 239 18 53 126 XP_064064683.1 hypothetical protein RB195_021874 [Necator americanus] diamond 1566 103 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
30050333 30050333 PRJNA682078_P_NODE_235131_length_249_cov_0.875000_g233354_i0 PRJNA682078 235131 249 0.875 2.17875 Caenorhabditis briggsae 6238 Nematoda Nematoda 52.4 1.47e-5   NR XP_002641086.1 6238 g233354 i0 38.2 1.63855421686747 68 42 81.9 0 208 5 18 85 XP_002641086.1 Protein CBG17465 [Caenorhabditis briggsae] diamond 408 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
30113626 30113626 PRJNA682078_P_NODE_48472_length_492_cov_1.677804_g46706_i0 PRJNA682078 48472 492 1.677804 8.25479568 Mesorhabditis belari 2138241 Nematoda Nematoda 44.3 0.0315   NR CAJ0952516.1 2138241 g46706 i0 31.4 0.426829268292683 70 47 42.7 1 209 418 29 97 CAJ0952516.1 unnamed protein product, partial [Mesorhabditis belari] diamond 210 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
30144992 30144992 PRJNA682078_P_NODE_9392_length_1157_cov_2.047048_g8176_i0 PRJNA682078 9392 1157 2.047048 23.68434536 Haemonchus contortus 6289 Nematoda Nematoda 83.2 1.19e-13   NR XGW33897.1 6289 g8176 i0 60 0.168539325842697 65 26 16.9 0 369 563 247 311 XGW33897.1 hypothetical protein V3C99_017972 [Haemonchus contortus] diamond 195 83.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
30240069 30240069 PRJNA682078_P_NODE_130632_length_313_cov_1.995833_g128855_i0 PRJNA682078 130632 313 1.995833 6.24695729 Haemonchus contortus 6289 Nematoda Nematoda 132 5.889999999999998e-35   NR XGW04337.1 6289 g128855 i0 59.2 8.78913738019169 103 42 98.7 0 311 3 214 316 XGW04337.1 hypothetical protein V3C99_015474 [Haemonchus contortus] diamond 2751 132 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
30536062 30536062 PRJNA682078_P_NODE_146353_length_298_cov_1.128889_g144576_i0 PRJNA682078 146353 298 1.128889 3.36408922 Metazoa 33208 Nematoda Nematoda 58.9 4.46e-8   NR EYB85944.1 53326 g144576 i0 45 3.73489932885906 60 33 60.4 0 185 6 1 60 EYB85944.1 hypothetical protein Y032_0287g1428 [Ancylostoma ceylanicum] diamond 1113 59.3 0.993254637436762 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
30757293 30757293 PRJNA682078_P_NODE_214174_length_255_cov_1.285714_g212397_i0 PRJNA682078 214174 255 1.285714 3.2785707 Metazoa 33208 Nematoda Nematoda 97.1 3.4300000000000004e-21   NR CDJ96990.1 6289 g212397 i0 57.5 1.89411764705882 80 34 94.1 0 254 15 342 421 CDJ96990.1 Glycosyltransferase and RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] diamond 483 97.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
30883626 30883626 PRJNA682078_P_NODE_216254_length_254_cov_1.220994_g214477_i0 PRJNA682078 216254 254 1.220994 3.10132476 Ancylostoma 29169 Nematoda Nematoda 57.8 1.93e-7   NR RCN51461.1 29170 g214477 i0 42.4 2.00787401574803 85 39 92.1 3 239 6 171 252 RCN51461.1 transposase [Ancylostoma caninum] diamond 510 58.2 0.993127147766323 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
31041975 31041975 PRJNA682078_P_NODE_50555_length_482_cov_1.246944_g48787_i0 PRJNA682078 50555 482 1.246944 6.01027008 root 1 Root_unresolved Root_unresolved 155 1.53e-40   NR ETN79898.1 51031 g48787 i0 49.1 5.91286307053942 163 78 98.3 2 476 3 547 709 ETN79898.1 hypothetical protein NECAME_18058, partial [Necator americanus] diamond 2850 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
31156004 31156004 PRJNA682078_P_NODE_272435_length_244_cov_0.900585_g270658_i0 PRJNA682078 272435 244 0.900585 2.1974274 Ancylostoma ceylanicum 53326 Nematoda Nematoda 60.5 1.39e-8   NR EYB95145.1 53326 g270658 i0 40.9 0.811475409836066 66 39 81.1 0 244 47 113 178 EYB95145.1 hypothetical protein Y032_0163g3481 [Ancylostoma ceylanicum] diamond 198 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
31187590 31187590 PRJNA682078_P_NODE_211155_length_257_cov_0.836957_g209378_i0 PRJNA682078 211155 257 0.836957 2.15097949 Ancylostoma caninum 29170 Nematoda Nematoda 91.3 6.05e-20   NR RCN33912.1 29170 g209378 i0 57.6 2.28793774319066 66 28 77 0 256 59 220 285 RCN33912.1 transposase, partial [Ancylostoma caninum] diamond 588 91.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
31314401 31314401 PRJNA682078_P_NODE_218215_length_253_cov_1.155556_g216438_i0 PRJNA682078 218215 253 1.155556 2.92355668 Pristionchus fissidentatus 1538716 Nematoda Nematoda 44.7 0.00823   NR GMT33030.1 1538716 g216438 i0 36.1 0.853754940711462 72 34 74.7 3 23 211 153 221 GMT33030.1 hypothetical protein PFISCL1PPCAC_24327, partial [Pristionchus fissidentatus] diamond 216 44.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
31725467 31725467 PRJNA682078_P_NODE_109257_length_339_cov_0.868421_g107480_i0 PRJNA682078 109257 339 0.868421 2.94394719 Necator americanus 51031 Nematoda Nematoda 96.3 1.87e-20   NR ETN79898.1 51031 g107480 i0 76.5 0.601769911504425 68 16 60.2 0 2 205 442 509 ETN79898.1 hypothetical protein NECAME_18058, partial [Necator americanus] diamond 204 96.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
32705630 32705630 PRJNA682078_P_NODE_266920_length_244_cov_1.713450_g265143_i0 PRJNA682078 266920 244 1.71345 4.180818 Caenorhabditis nigoni 1611254 Nematoda Nematoda 70.5 1.29e-12   NR PIC37921.1 1611254 g265143 i0 43.8 3.54098360655738 73 41 89.8 0 26 244 58 130 PIC37921.1 hypothetical protein B9Z55_010100 [Caenorhabditis nigoni] diamond 864 70.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis nigoni
32768620 32768620 PRJNA682078_P_NODE_237240_length_249_cov_0.875000_g235463_i0 PRJNA682078 237240 249 0.875 2.17875 Meloidogyne enterolobii 390850 Nematoda Nematoda 42.7 0.0339   NR CAD2180045.1 390850 g235463 i0 41.7 3.6144578313253 60 26 72.3 1 68 247 1 51 CAD2180045.1 unnamed protein product [Meloidogyne enterolobii] diamond 900 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;