RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682078" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA682078 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27587701 27587701 PRJNA682078_P_NODE_240664_length_248_cov_1.571429_g238887_i0 PRJNA682078 240664 248 1.571429 3.89714392 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.3 3.48e-15   NR MEX0595609.1 2053589 g238887 i0 43.8 0.967741935483871 80 43 96.8 1 1 240 277 354 MEX0595609.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31820362 31820362 PRJNA682078_P_NODE_254237_length_246_cov_1.369942_g252460_i0 PRJNA682078 254237 246 1.369942 3.37005732 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.9 9.23e-9   NR HEY4489554.1 2053589 g252460 i0 44.9 0.951219512195122 78 39 93.9 2 243 13 26 100 HEY4489554.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 234 58.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;