RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682078", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA682078 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24887812 24887812 PRJNA682078_P_NODE_265420_length_245_cov_0.895349_g263643_i0 PRJNA682078 265420 245 0.895349 2.19360505 Lentinula edodes deltaflexivirus 2 2778980 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|1928162793|gb|MN744724.1| 2778980 g263643 i0 100 1 245 0 100 0 1 245 1669 1425 Lentinula edodes deltaflexivirus 2 isolate Le10WIL RNA-dependent RNA polymerase gene, partial cds; and hypothetical protein gene, complete cds blastn 245 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Lentinula edodes deltaflexivirus 2
29576519 29576519 PRJNA682078_P_NODE_242770_length_248_cov_0.880000_g240993_i0 PRJNA682078 242770 248 0.88 2.1824 Sjack bromovirus 3068463 Viruses Viruses 90.1 8.53e-19   NR WPR17531.1 3068463 g240993 i0 50 0.991935483870968 82 41 99.2 0 246 1 86 167 WPR17531.1 MAG: replicase protein, partial [Sjack bromovirus] diamond 246 90.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Sjack bromovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;