RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA682078", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 13 ✖

tax_kingdom 1

  • Metazoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA682078 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
660812 660812 PRJNA682078_P_NODE_233281_length_249_cov_2.625000_g231504_i0 PRJNA682078 233281 249 2.625 6.53625 Philodina citrina 468664 Rotifera other_Eukaryota 375 1.18e-99   NTclustered gi|407227484|emb|FR856884.1| 468664 g231504 i0 93.952 5.50200803212851 248 15 99 0 1 248 2145 2392 Philodina citrina complete mitochondrial genome blastn 1370 375 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
662125 662125 PRJNA682078_P_NODE_284261_length_242_cov_0.911243_g282484_i0 PRJNA682078 284261 242 0.911243 2.20520806 Rotaria 231623 Rotifera other_Eukaryota 157 5.77e-45   NR CAF5178728.1 392030 g282484 i0 92.5 23.801652892562 80 6 99.2 0 242 3 257 336 CAF5178728.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 5760 157 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
5001603 5001603 PRJNA682078_P_NODE_24864_length_684_cov_6.101473_g23160_i0 PRJNA682078 24864 684 6.101473 41.73407532 Adineta 104781 Rotifera other_Eukaryota 1147 0   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g23160 i0 96.93 62.4590643274854 684 21 100 0 1 684 1463 2146 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 42722 1158 0.990500863557858 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
8310798 8310798 PRJNA682078_P_NODE_103487_length_346_cov_3.417582_g101711_i0 PRJNA682078 103487 346 3.417582 11.82483372 Adineta vaga 104782 Rotifera other_Eukaryota 562 1.22e-155   NTclustered gi|259129963|gb|GQ398061.1| 104782 g101711 i0 95.954 76.8439306358381 346 14 100 0 1 346 6650 6995 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 26588 562 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13417885 13417885 PRJNA682078_P_NODE_91971_length_364_cov_6.323024_g90195_i0 PRJNA682078 91971 364 6.323024 23.01580736 Adineta vaga 104782 Rotifera other_Eukaryota 580 3.56e-161   NTclustered gi|259129963|gb|GQ398061.1| 104782 g90195 i0 96.1 4.32967032967033 359 9 98 5 1 357 10043 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1576 580 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15202787 15202787 PRJNA682078_P_NODE_68612_length_416_cov_3.793003_g66837_i0 PRJNA682078 68612 416 3.793003 15.77889248 Metazoa 33208 Rotifera other_Eukaryota 715 0   NTclustered gi|37785582|gb|AY210469.1| 96448 g66837 i0 97.613 78.1971153846154 419 7 100 1 1 416 2721 3139 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 32530 715 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
23616182 23616182 PRJNA682078_P_NODE_65479_length_425_cov_4.420455_g63704_i0 PRJNA682078 65479 425 4.420455 18.78693375 Adineta vaga 104782 Rotifera other_Eukaryota 756 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g63704 i0 98.821 85.522352941176507 424 5 99 0 1 424 4178 4601 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 36347 756 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
28072799 28072799 PRJNA682078_P_NODE_289665_length_241_cov_0.916667_g287888_i0 PRJNA682078 289665 241 0.916667 2.20916747 Rotaria 231623 Rotifera other_Eukaryota 60.5 2.06e-8   NR CAF2109629.1 392030 g287888 i0 43 5.02904564315353 79 30 98.3 1 3 239 2386 2449 CAF2109629.1 unnamed protein product [Rotaria magnacalcarata] diamond 1212 60.8 0.995065789473684 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29071761 29071761 PRJNA682078_P_NODE_276328_length_243_cov_0.905882_g274551_i0 PRJNA682078 276328 243 0.905882 2.20129326 Adineta steineri 433720 Rotifera other_Eukaryota 48.5 3.31e-4   NR CAF1016098.1 433720 g274551 i0 52.1 1.18518518518519 48 22 58 1 2 142 170 217 CAF1016098.1 unnamed protein product [Adineta steineri] diamond 288 48.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29702641 29702641 PRJNA682078_P_NODE_221870_length_251_cov_1.179775_g220093_i0 PRJNA682078 221870 251 1.179775 2.96123525 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 66.2 4.32e-11   NR CAF2998091.1 2762512 g220093 i0 47 0.788844621513944 66 35 78.9 0 202 5 20 85 CAF2998091.1 unnamed protein product [Rotaria sp. Silwood2] diamond 198 66.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
30208179 30208179 PRJNA682078_P_NODE_249152_length_247_cov_0.885057_g247375_i0 PRJNA682078 249152 247 0.885057 2.18609079 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 50.8 3.64e-5   NR CAF3750527.1 2762511 g247375 i0 40.3 0.813765182186235 67 40 81.4 0 45 245 152 218 CAF3750527.1 unnamed protein product [Rotaria sp. Silwood1] diamond 201 50.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
30713943 30713943 PRJNA682078_P_NODE_246274_length_247_cov_3.344828_g244497_i0 PRJNA682078 246274 247 3.344828 8.26172516 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 40.8 0.0495   NR CAF4346029.1 392030 g244497 i0 70.4 0.327935222672065 27 7 31.6 1 243 166 8 34 CAF4346029.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 81 40.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
31946886 31946886 PRJNA682078_P_NODE_84157_length_379_cov_1.542484_g82382_i0 PRJNA682078 84157 379 1.542484 5.84601436 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 119 2.05e-30   NR CAF1015630.1 1234261 g82382 i0 58 2.13720316622691 88 37 69.7 0 378 115 89 176 CAF1015630.1 unnamed protein product [Didymodactylos carnosus] diamond 810 119 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;