RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA682078", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 6 ✖

bioproject 1

  • PRJNA682078 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5765871 5765871 PRJNA682078_P_NODE_289185_length_241_cov_0.916667_g287408_i0 PRJNA682078 289185 241 0.916667 2.20916747 Inoviridae sp. 2219103 Viruses Viruses 243 1.2e-59   NTclustered gi|2053040871|tpg|BK024249.1| 2219103 g287408 i0 88.832 79.6307053941909 197 22 82 0 45 241 10184 9988 MAG TPA_asm: Inoviridae sp. isolate ct4CW1, partial genome blastn 19191 243 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
10866136 10866136 PRJNA682078_P_NODE_283029_length_242_cov_0.911243_g281252_i0 PRJNA682078 283029 242 0.911243 2.20520806 Inoviridae sp. 2219103 Viruses Viruses 276 1.19e-69   NTclustered gi|2054600116|tpg|BK021722.1| 2219103 g281252 i0 87.243 3.99586776859504 243 29 100 2 1 242 12704 12463 MAG TPA_asm: Inoviridae sp. isolate ctZ6V1, partial genome blastn 967 276 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
13412814 13412814 PRJNA682078_P_NODE_15651_length_871_cov_1.869674_g14192_i0 PRJNA682078 15651 871 1.869674 16.28486054 Inoviridae sp. 2219103 Viruses Viruses 1382 0   NTclustered gi|2906144089|gb|PQ646088.1| 2219103 g14192 i0 95.298 4.00459242250287 872 40 100 1 1 871 3513 4384 MAG: Inoviridae sp. isolate k127_2193482 genomic sequence blastn 3488 1382 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
17236860 17236860 PRJNA682078_P_NODE_152894_length_292_cov_1.301370_g151117_i0 PRJNA682078 152894 292 1.30137 3.8000004 Inoviridae sp. 2219103 Viruses Viruses 183 9.2e-42   NTclustered gi|2906144089|gb|PQ646088.1| 2219103 g151117 i0 78.305 1.01027397260274 295 56 99 6 1 291 231 521 MAG: Inoviridae sp. isolate k127_2193482 genomic sequence blastn 295 183 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19786499 19786499 PRJNA682078_P_NODE_180136_length_274_cov_2.865672_g178359_i0 PRJNA682078 180136 274 2.865672 7.85194128 Inoviridae sp. 2219103 Viruses Viruses 473 4.53e-129   NTclustered gi|2906144089|gb|PQ646088.1| 2219103 g178359 i0 97.81 4.01094890510949 274 6 100 0 1 274 2333 2060 MAG: Inoviridae sp. isolate k127_2193482 genomic sequence blastn 1099 473 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
22341294 22341294 PRJNA682078_P_NODE_96318_length_357_cov_1.975352_g94542_i0 PRJNA682078 96318 357 1.975352 7.05200664 Phage blackswan219-1 2863001 Viruses Viruses 305 2.35e-78   NTclustered gi|2080073924|gb|MZ474489.1| 2863001 g94542 i0 82.609 0.966386554621849 345 60 97 0 11 355 5750 6094 Phage blackswan219-1, complete genome blastn 345 305 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Phage blackswan219-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;