contig_metadata
11 rows where bioproject = "PRJNA682078" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 661014 | 661014 | PRJNA682078_P_NODE_241121_length_248_cov_1.320000_g239344_i0 | PRJNA682078 | 241121 | 248 | 1.32 | 3.2736 | Leptotrichia sp. oral taxon 218 | 712361 | Bacteria | Bacteria | 448 | 2.4499999999999996e-121 | NTclustered | gi|2028887161|gb|CP072377.1| | 712361 | g239344 | i0 | 99.194 | 3 | 248 | 2 | 100 | 0 | 1 | 248 | 224947 | 224700 | Leptotrichia sp. oral taxon 218 strain F0707 chromosome, complete genome | blastn | 744 | 448 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 218 | ||
| 662377 | 662377 | PRJNA682078_P_NODE_293901_length_238_cov_2.606061_g292124_i0 | PRJNA682078 | 293901 | 238 | 2.606061 | 6.20242518 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 424 | 3.93e-114 | NTclustered | gi|2706506546|gb|CP084156.1| | 76857 | g292124 | i0 | 98.739 | 99.9411764705882 | 238 | 3 | 100 | 0 | 1 | 238 | 244367 | 244130 | Fusobacterium polymorphum strain KCOM2510 chromosome | blastn | 23786 | 424 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 2446944 | 2446944 | PRJNA682078_P_NODE_116062_length_330_cov_1.198444_g114285_i0 | PRJNA682078 | 116062 | 330 | 1.198444 | 3.9548652 | Fusobacterium | 848 | Bacteria | Bacteria | 599 | 8.849999999999995e-167 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g114285 | i0 | 99.394 | 479.545454545455 | 330 | 2 | 100 | 0 | 1 | 330 | 463065 | 462736 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 158250 | 604 | 0.991721854304636 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 9589292 | 9589292 | PRJNA682078_P_NODE_228448_length_250_cov_1.096045_g226671_i0 | PRJNA682078 | 228448 | 250 | 1.096045 | 2.7401125 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 424 | 4.16e-114 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g226671 | i0 | 97.2 | 1 | 250 | 7 | 100 | 0 | 1 | 250 | 2168733 | 2168484 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 250 | 424 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 10865557 | 10865557 | PRJNA682078_P_NODE_260129_length_245_cov_1.790698_g258352_i0 | PRJNA682078 | 260129 | 245 | 1.790698 | 4.3872101 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 442 | 1.1199999999999994e-119 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g258352 | i0 | 99.184 | 461.175510204082 | 245 | 2 | 100 | 0 | 1 | 245 | 199525 | 199281 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 112988 | 442 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 15202141 | 15202141 | PRJNA682078_P_NODE_287572_length_241_cov_1.410714_g285795_i0 | PRJNA682078 | 287572 | 241 | 1.410714 | 3.39982074 | Leptotrichia | 32067 | Bacteria | Bacteria | 396 | 8.7e-106 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g285795 | i0 | 97.425 | 499.95020746888 | 233 | 5 | 96 | 1 | 10 | 241 | 660 | 892 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 120488 | 396 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 19787892 | 19787892 | PRJNA682078_P_NODE_236516_length_249_cov_0.875000_g234739_i0 | PRJNA682078 | 236516 | 249 | 0.875 | 2.17875 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 449 | 6.840000000000001e-122 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g234739 | i0 | 99.197 | 15.9116465863454 | 249 | 2 | 100 | 0 | 1 | 249 | 1944715 | 1944467 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 3962 | 449 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 22339089 | 22339089 | PRJNA682078_P_NODE_269998_length_244_cov_0.900585_g268221_i0 | PRJNA682078 | 269998 | 244 | 0.900585 | 2.1974274 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 407 | 4.08e-109 | NTclustered | gi|1276707709|gb|CP024699.1| | 2663009 | g268221 | i0 | 96.721 | 99.6680327868852 | 244 | 8 | 100 | 0 | 1 | 244 | 1860089 | 1859846 | Fusobacterium pseudoperiodonticum strain KCOM 1261 chromosome, complete genome | blastn | 24319 | 407 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 23612081 | 23612081 | PRJNA682078_P_NODE_165279_length_283_cov_5.242857_g163502_i0 | PRJNA682078 | 165279 | 283 | 5.242857 | 14.83728531 | Leptotrichia sp. SK-5 | 3075818 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|2899356158|dbj|AP028931.1| | 3075818 | g163502 | i0 | 94.118 | 0.120141342756184 | 34 | 2 | 12 | 0 | 229 | 262 | 1247371 | 1247404 | Leptotrichia sp. SK-5 DNA, complete genome | blastn | 34 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. SK-5 | ||
| 26733520 | 26733520 | PRJNA682078_P_NODE_264221_length_245_cov_0.895349_g262444_i0 | PRJNA682078 | 264221 | 245 | 0.895349 | 2.19360505 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 110 | 2.06e-26 | NR | BBM41780.1 | 157687 | g262444 | i0 | 61.7 | 6.94285714285714 | 81 | 31 | 99.2 | 0 | 244 | 2 | 14 | 94 | BBM41780.1 hypothetical protein JCM16777_0003 [Leptotrichia wadei] | diamond | 1701 | 110 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 28535025 | 28535025 | PRJNA682078_P_NODE_248347_length_247_cov_0.885057_g246570_i0 | PRJNA682078 | 248347 | 247 | 0.885057 | 2.18609079 | Fusobacteriota bacterium | 2060921 | Bacteria | Bacteria | 79 | 4.73e-15 | NR | HCB64138.1 | 2060921 | g246570 | i0 | 45.5 | 0.935222672064777 | 77 | 42 | 93.5 | 0 | 3 | 233 | 292 | 368 | HCB64138.1 hypothetical protein [Fusobacteriota bacterium] | diamond | 231 | 79 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;