contig_metadata
13 rows where bioproject = "PRJNA682078", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4490366 | 4490366 | PRJNA682078_P_NODE_297024_length_229_cov_2.807692_g295247_i0 | PRJNA682078 | 297024 | 229 | 2.807692 | 6.42961468 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 204 | 5.33e-48 | NTclustered | gi|2874253843|emb|OY969899.1| | 2052178 | g295247 | i0 | 83.262 | 425.152838427948 | 233 | 28 | 100 | 11 | 1 | 229 | 2631847 | 2632072 | MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1 | blastn | 97360 | 204 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 7039947 | 7039947 | PRJNA682078_P_NODE_253626_length_246_cov_1.763006_g251849_i0 | PRJNA682078 | 253626 | 246 | 1.763006 | 4.33699476 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 95.3 | 3.64e-15 | NTclustered | gi|1869331976|gb|CP058704.1| | 2052176 | g251849 | i0 | 95 | 1.78861788617886 | 60 | 3 | 24 | 0 | 185 | 244 | 1923494 | 1923435 | Parachlamydiaceae bacterium isolate SSA5 chromosome | blastn | 440 | 95.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 8311643 | 8311643 | PRJNA682078_P_NODE_138487_length_305_cov_2.396552_g136710_i0 | PRJNA682078 | 138487 | 305 | 2.396552 | 7.3094836 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 322 | 1.96e-83 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g136710 | i0 | 86.824 | 117.744262295082 | 296 | 29 | 97 | 9 | 6 | 295 | 2058561 | 2058852 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 35912 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 10100091 | 10100091 | PRJNA682078_P_NODE_100448_length_351_cov_1.327338_g98672_i0 | PRJNA682078 | 100448 | 351 | 1.327338 | 4.65895638 | Parachlamydia | 83551 | Bacteria | Bacteria | 289 | 2.32e-73 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g98672 | i0 | 86.397 | 145.487179487179 | 272 | 28 | 76 | 9 | 29 | 296 | 1496 | 1762 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 51066 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 14688314 | 14688314 | PRJNA682078_P_NODE_170052_length_281_cov_0.961538_g168275_i0 | PRJNA682078 | 170052 | 281 | 0.961538 | 2.70192178 | Candidatus Euplotechlamydia quinta | 2936506 | Bacteria | Bacteria | 399 | 8.029999999999998e-107 | NTclustered | gi|2226301499|gb|ON271409.1| | 2936506 | g168275 | i0 | 92.553 | 96.0284697508897 | 282 | 16 | 99 | 5 | 1 | 279 | 292 | 13 | Chlamydiia bacterium (ex Euplotes octocarinatus) isolate Zam5b-1 16S ribosomal RNA gene, partial sequence | blastn | 26984 | 399 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Euplotechlamydia | Candidatus Euplotechlamydia quinta | |
| 22337840 | 22337840 | PRJNA682078_P_NODE_218658_length_252_cov_2.268156_g216881_i0 | PRJNA682078 | 218658 | 252 | 2.268156 | 5.71575312 | Candidatus Rubidus massiliensis | 1444712 | Bacteria | Bacteria | 449 | 6.94e-122 | NTclustered | gi|565666443|emb|HG726047.1| | 1444712 | g216881 | i0 | 98.81 | 97.2103174603175 | 252 | 3 | 100 | 0 | 1 | 252 | 403 | 152 | Candidatus Rubidus massiliensis partial 16S rRNA gene, strain Rubis | blastn | 24497 | 449 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Candidatus Rubidus | Candidatus Rubidus massiliensis | |
| 22340902 | 22340902 | PRJNA682078_P_NODE_7998_length_1270_cov_2.502089_g6865_i0 | PRJNA682078 | 7998 | 1270 | 2.502089 | 31.7765303 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 1735 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g6865 | i0 | 91.366 | 173.476377952756 | 1274 | 100 | 100 | 7 | 1 | 1270 | 653436 | 654703 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 220315 | 1735 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 26638892 | 26638892 | PRJNA682078_P_NODE_244021_length_248_cov_0.880000_g242244_i0 | PRJNA682078 | 244021 | 248 | 0.88 | 2.1824 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 60.1 | 2.74e-8 | NR | MEI8365171.1 | 2052176 | g242244 | i0 | 60 | 0.544354838709677 | 45 | 16 | 52 | 1 | 119 | 247 | 11 | 55 | MEI8365171.1 hypothetical protein [Parachlamydiaceae bacterium] | diamond | 135 | 60.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 27335101 | 27335101 | PRJNA682078_P_NODE_226003_length_251_cov_0.865169_g224226_i0 | PRJNA682078 | 226003 | 251 | 0.865169 | 2.17157419 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 71.6 | 2.62e-12 | NR | MFI5343006.1 | 2047757 | g224226 | i0 | 42.2 | 0.99203187250996006 | 83 | 47 | 98 | 1 | 1 | 246 | 242 | 324 | MFI5343006.1 hypothetical protein [Chlamydiales bacterium] | diamond | 249 | 71.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27650883 | 27650883 | PRJNA682078_P_NODE_251664_length_247_cov_0.885057_g249887_i0 | PRJNA682078 | 251664 | 247 | 0.885057 | 2.18609079 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 54.7 | 2.51e-6 | NR | MCC6128156.1 | 2081524 | g249887 | i0 | 40 | 1.5668016194332 | 65 | 39 | 78.9 | 0 | 4 | 198 | 1131 | 1195 | MCC6128156.1 hypothetical protein [Chlamydiota bacterium] | diamond | 387 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 30777252 | 30777252 | PRJNA682078_P_NODE_231194_length_250_cov_0.870056_g229417_i0 | PRJNA682078 | 231194 | 250 | 0.870056 | 2.17514 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 112 | 9.44e-27 | NR | WP_059061894.1 | 389348 | g229417 | i0 | 62.5 | 0.96 | 80 | 29 | 94.8 | 1 | 249 | 13 | 290 | 369 | WP_059061894.1 transcription-repair coupling factor [Candidatus Protochlamydia naegleriophila] | diamond | 240 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 31472704 | 31472704 | PRJNA682078_P_NODE_199056_length_263_cov_2.300000_g197279_i0 | PRJNA682078 | 199056 | 263 | 2.3 | 6.049 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 58.2 | 3.3e-8 | NR | HEV8051030.1 | 2052176 | g197279 | i0 | 67.6 | 0.422053231939163 | 37 | 12 | 42.2 | 0 | 153 | 263 | 3 | 39 | HEV8051030.1 hypothetical protein [Parachlamydiaceae bacterium] | diamond | 111 | 58.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32232040 | 32232040 | PRJNA682078_P_NODE_165618_length_283_cov_1.857143_g163841_i0 | PRJNA682078 | 165618 | 283 | 1.857143 | 5.25571469 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 54.3 | 5.17e-6 | NR | MEM1283013.1 | 2081524 | g163841 | i0 | 28.6 | 3.8904593639576 | 98 | 63 | 99.6 | 2 | 1 | 282 | 143 | 237 | MEM1283013.1 6-hydroxymethylpterin diphosphokinase MptE-like protein [Chlamydiota bacterium] | diamond | 1101 | 54.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;