RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA682078", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA682078 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23614849 23614849 PRJNA682078_P_NODE_277439_length_243_cov_0.905882_g275662_i0 PRJNA682078 277439 243 0.905882 2.20129326 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 110 1.28e-19   NTclustered gi|2107742610|gb|CP070837.1| 2035772 g275662 i0 89.535 31.8888888888889 86 9 35 0 60 145 702659 702744 MAG: Candidatus Omnitrophota bacterium isolate bin103 chromosome blastn 7749 110 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28408545 28408545 PRJNA682078_P_NODE_196186_length_265_cov_1.583333_g194409_i0 PRJNA682078 196186 265 1.583333 4.19583245 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.00932   NR MBI4708096.1 2035772 g194409 i0 37.5 0.815094339622642 72 37 75.8 2 204 4 204 272 MBI4708096.1 alpha/beta fold hydrolase [Candidatus Omnitrophota bacterium] diamond 216 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29229683 29229683 PRJNA682078_P_NODE_291689_length_241_cov_0.916667_g289912_i0 PRJNA682078 291689 241 0.916667 2.20916747 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 76.6 1.23e-14   NR MBF0485480.1 2035772 g289912 i0 51.5 0.821576763485477 66 32 82.2 0 42 239 90 155 MBF0485480.1 class I SAM-dependent methyltransferase [Candidatus Omnitrophota bacterium] diamond 198 76.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31883632 31883632 PRJNA682078_P_NODE_159717_length_287_cov_1.439252_g157940_i0 PRJNA682078 159717 287 1.439252 4.13065324 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 70.1 2.29e-12   NR MCG8431100.1 2035772 g157940 i0 39.3 1.75609756097561 84 51 87.8 0 252 1 17 100 MCG8431100.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 504 70.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;