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contig_metadata

5 rows where bioproject = "PRJNA682078", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 5 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 5 ✖

bioproject 1

  • PRJNA682078 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26765616 26765616 PRJNA682078_P_NODE_262521_length_245_cov_0.895349_g260744_i0 PRJNA682078 262521 245 0.895349 2.19360505 Ignavibacteria bacterium 2053306 Bacteria Bacteria 110 3.06e-26   NR MBK7033384.1 2053306 g260744 i0 64.2 0.991836734693878 81 29 99.2 0 245 3 149 229 MBK7033384.1 hypothetical protein [Ignavibacteria bacterium] diamond 243 110 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
27714347 27714347 PRJNA682078_P_NODE_96104_length_358_cov_0.954386_g94328_i0 PRJNA682078 96104 358 0.954386 3.41670188 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 47 0.00364   NR HEY6436184.1 2651163 g94328 i0 40.8 0.410614525139665 49 29 41.1 0 207 353 1 49 HEY6436184.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 147 47 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
28408578 28408578 PRJNA682078_P_NODE_268346_length_244_cov_0.900585_g266569_i0 PRJNA682078 268346 244 0.900585 2.1974274 Ignavibacteria bacterium 2053306 Bacteria Bacteria 128 3.14e-33   NR MDH3252767.1 2053306 g266569 i0 73.8 1.93032786885246 80 21 98.4 0 244 5 200 279 MDH3252767.1 30S ribosomal protein S12 methylthiotransferase RimO [Ignavibacteria bacterium] diamond 471 128 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28598071 28598071 PRJNA682078_P_NODE_167867_length_282_cov_1.339713_g166090_i0 PRJNA682078 167867 282 1.339713 3.77799066 Ignavibacteria bacterium 2053306 Bacteria Bacteria 85.1 1.88e-17   NR MDP3441493.1 2053306 g166090 i0 97.2 0.382978723404255 36 1 38.3 0 109 2 1 36 MDP3441493.1 IS982 family transposase [Ignavibacteria bacterium] diamond 108 85.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29987322 29987322 PRJNA682078_P_NODE_200731_length_262_cov_2.259259_g198954_i0 PRJNA682078 200731 262 2.259259 5.91925858 Ignavibacteria bacterium 2053306 Bacteria Bacteria 56.6 1.91e-7   NR MDP2365106.1 2053306 g198954 i0 56.8 0.50381679389313 44 19 50.4 0 6 137 59 102 MDP2365106.1 efflux RND transporter periplasmic adaptor subunit [Ignavibacteria bacterium] diamond 132 56.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;