RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682078", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA682078 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9588728 9588728 PRJNA682078_P_NODE_206828_length_259_cov_1.344086_g205051_i0 PRJNA682078 206828 259 1.344086 3.48118274 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 75.9 9.96e-14   NR HWC04017.1 2072417 g205051 i0 47.1 1.00772200772201 87 38 92.7 2 241 2 376 461 HWC04017.1 branched-chain amino acid ABC transporter ATP-binding protein/permease [Candidatus Methylomirabilota bacterium] diamond 261 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30410079 30410079 PRJNA682078_P_NODE_172733_length_279_cov_1.330097_g170956_i0 PRJNA682078 172733 279 1.330097 3.71097063 Bacteria 2 Bacteria Bacteria 56.2 9.4e-7   NR HWN57966.1 2072417 g170956 i0 40.8 5.47311827956989 98 45 92.5 4 8 265 206 302 HWN57966.1 PAS domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 1527 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;