RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA682078", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA682078 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26670293 26670293 PRJNA682078_P_NODE_243821_length_248_cov_0.880000_g242044_i0 PRJNA682078 243821 248 0.88 2.1824 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 85.1 4.83e-17   NR MCF7812639.1 2044595 g242044 i0 52.3 2.00806451612903 86 37 99.2 1 1 246 237 322 MCF7812639.1 DNA translocase FtsK [Candidatus Altimarinota bacterium] diamond 498 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28629745 28629745 PRJNA682078_P_NODE_242287_length_248_cov_0.880000_g240510_i0 PRJNA682078 242287 248 0.88 2.1824 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 64.3 3.01e-10   NR NDK08657.1 2044595 g240510 i0 65.9 1.56048387096774 44 15 53.2 0 206 75 5 48 NDK08657.1 HD domain-containing protein [Candidatus Altimarinota bacterium] diamond 387 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;