RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA681861" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA681861 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7036114 7036114 PRJNA681861_P_NODE_4426_length_1126_cov_6.423883_g3307_i1 PRJNA681861 4426 1126 6.423883 72.33292258 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 1989 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g3307 i1 98.579 1361.88721136767 1126 15 100 1 1 1126 778 1902 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 1533485 1989 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
17235560 17235560 PRJNA681861_P_NODE_4414_length_1128_cov_6.141037_g3307_i0 PRJNA681861 4414 1128 6.141037 69.27089736 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 1932 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g3307 i0 97.429 1533.37943262411 1128 26 100 1 1 1128 1902 778 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 1729652 1932 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;