RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA681861", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 4 ✖

tax_kingdom 1

  • Pseudomonadati · 4 ✖

bioproject 1

  • PRJNA681861 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8310699 8310699 PRJNA681861_P_NODE_11707_length_516_cov_20.287474_g9732_i0 PRJNA681861 11707 516 20.287474 104.68336584 Abditibacteriota bacterium 2783868 Bacteria Bacteria 693 0   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g9732 i0 90.909 235.480620155039 517 45 100 2 1 516 2852658 2853173 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 121508 693 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
9586038 9586038 PRJNA681861_P_NODE_7828_length_727_cov_10.967049_g5590_i1 PRJNA681861 7828 727 10.967049 79.73044623 Abditibacteriota bacterium 2783868 Bacteria Bacteria 383 2.2699999999999995e-101   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g5590 i1 87.209 47.9711141678129 344 34 96 9 389 727 2851676 2852014 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 34875 383 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
12136966 12136966 PRJNA681861_P_NODE_7150_length_779_cov_11.882667_g5590_i0 PRJNA681861 7150 779 11.882667 92.56597593 Abditibacteriota bacterium 2783868 Bacteria Bacteria 433 2.3899999999999998e-116   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g5590 i0 87.023 46.9255455712452 393 40 96 9 389 775 2851676 2852063 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 36555 433 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14686601 14686601 PRJNA681861_P_NODE_11552_length_522_cov_18.243408_g9587_i0 PRJNA681861 11552 522 18.243408 95.23058976 Abditibacteriota bacterium 2783868 Bacteria Bacteria 645 1.8499999999999992e-180   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g9587 i0 88.91 182.348659003831 523 50 100 3 1 522 2852658 2853173 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 95186 645 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;