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contig_metadata

31 rows where bioproject = "PRJNA681822" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA681822 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1931972 1931972 PRJNA681822_P_NODE_451482_length_244_cov_0.900585_g449992_i0 PRJNA681822 451482 244 0.900585 2.1974274 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 239 1.57e-58   NTclustered gi|695416746|ref|XM_009528626.1| 67593 g449992 i0 86.854 80.0655737704918 213 28 87 0 31 243 936 724 Phytophthora sojae hypothetical protein mRNA blastn 19536 239 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5756928 5756928 PRJNA681822_P_NODE_235185_length_290_cov_1.285714_g233696_i0 PRJNA681822 235185 290 1.285714 3.7285706 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 139 7.879999999999999e-40   NR KAF1780465.1 29920 g233696 i0 70.8 17.8655172413793 96 28 99.3 0 1 288 16 111 KAF1780465.1 Ribosomal protein L22e [Phytophthora cactorum] diamond 5181 139 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
8823379 8823379 PRJNA681822_P_NODE_280847_length_279_cov_1.364078_g279358_i0 PRJNA681822 280847 279 1.364078 3.80577762 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 155 3.319999999999999e-43   NR DBA03298.1 4803 g279358 i0 90.2 0.881720430107527 82 8 88.2 0 32 277 185 266 DBA03298.1 TPA: hypothetical protein N0F65_011657 [Lagenidium giganteum] diamond 246 155 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
12132966 12132966 PRJNA681822_P_NODE_260630_length_284_cov_1.312796_g259141_i0 PRJNA681822 260630 284 1.312796 3.72834064 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 171 9.73e-50   NR XP_012213591.1 695850 g259141 i0 88.3 10.9225352112676 94 11 99.3 0 1 282 121 214 XP_012213591.1 protein transporter Sec61 subunit alpha [Saprolegnia parasitica CBS 223.65] diamond 3102 171 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
12135079 12135079 PRJNA681822_P_NODE_432070_length_246_cov_0.890173_g430581_i0 PRJNA681822 432070 246 0.890173 2.18982558 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 446 8.719999999999999e-121   NTclustered gi|67090782|gb|DQ007474.1| 65357 g430581 i0 99.194 101.09756097561 248 0 100 1 1 246 270 23 Albugo candida isolate AR330 large subunit ribosomal RNA gene, partial sequence blastn 24870 446 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
13924184 13924184 PRJNA681822_P_NODE_225791_length_293_cov_2.140909_g224302_i0 PRJNA681822 225791 293 2.140909 6.27286337 root 1 Root_unresolved Root_unresolved 531 2.86e-146   NTclustered gi|166044655|emb|CU367564.1| 100861 g224302 i0 99.317 28.4334470989761 293 2 100 0 1 293 716 424 Aphanomyces euteiches cDNA blastn 8331 531 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
14685398 14685398 PRJNA681822_P_NODE_483432_length_241_cov_0.916667_g481942_i0 PRJNA681822 483432 241 0.916667 2.20916747 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 114 1.05e-29   NR DAZ97693.1 4803 g481942 i0 81.8 4.25726141078838 66 12 82.2 0 241 44 60 125 DAZ97693.1 TPA: hypothetical protein N0F65_009694 [Lagenidium giganteum] diamond 1026 114 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
19778579 19778579 PRJNA681822_P_NODE_127536_length_361_cov_0.979167_g126049_i0 PRJNA681822 127536 361 0.979167 3.53479287 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 250 1.13e-61   NTclustered gi|698822976|ref|XM_009846215.1| 112090 g126049 i0 82.746 58.8808864265928 284 46 78 3 1 283 246 527 Aphanomyces astaci 40S ribosomal protein S13 mRNA blastn 21256 250 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
19778814 19778814 PRJNA681822_P_NODE_144096_length_346_cov_1.523810_g142608_i0 PRJNA681822 144096 346 1.52381 5.2723826 Pythium monospermum 92964 SAR_Eukaryotes SAR_Eukaryotes 612 1.1999999999999996e-170   NTclustered gi|33520250|gb|AY273995.1| 92964 g142608 i0 98.555 98.9219653179191 346 5 100 0 1 346 418 73 Pythium monospermum large subunit ribosomal RNA gene, partial sequence blastn 34227 612 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium monospermum
20297255 20297255 PRJNA681822_P_NODE_44556_length_558_cov_3.581443_g43106_i0 PRJNA681822 44556 558 3.581443 19.98445194 root 1 Root_unresolved Root_unresolved 920 0   NTclustered gi|166046685|emb|CU367795.1| 100861 g43106 i0 96.416 99.8763440860215 558 20 100 0 1 558 29 586 Aphanomyces euteiches cDNA blastn 55731 926 0.993520518358531 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27366763 27366763 PRJNA681822_P_NODE_406643_length_249_cov_0.875000_g405154_i0 PRJNA681822 406643 249 0.875 2.17875 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0202   NR DAZ96433.1 4803 g405154 i0 53.1 0.590361445783133 49 20 56.6 2 199 59 104 151 DAZ96433.1 TPA: hypothetical protein N0F65_006479 [Lagenidium giganteum] diamond 147 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
27536197 27536197 PRJNA681822_P_NODE_322423_length_268_cov_1.579487_g320934_i0 PRJNA681822 322423 268 1.579487 4.23302516 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 144 6.01e-43   NR KAF0728504.1 100861 g320934 i0 78.8 7.15298507462687 80 17 89.6 0 6 245 3 82 KAF0728504.1 hypothetical protein Ae201684_013690 [Aphanomyces euteiches] diamond 1917 145 0.993103448275862 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27839903 27839903 PRJNA681822_P_NODE_354044_length_259_cov_1.655914_g352555_i0 PRJNA681822 354044 259 1.655914 4.28881726 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 96.7 1.75e-21   NR DAZ92499.1 4803 g352555 i0 95.8 0.555984555984556 48 2 55.6 0 257 114 326 373 DAZ92499.1 TPA: hypothetical protein N0F65_012729 [Lagenidium giganteum] diamond 144 96.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28029654 28029654 PRJNA681822_P_NODE_307245_length_272_cov_1.547739_g305756_i0 PRJNA681822 307245 272 1.547739 4.20985008 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 60.5 3.01e-8   NR XP_067819266.1 4779 g305756 i0 41.9 1.42279411764706 74 38 81.6 1 3 224 472 540 XP_067819266.1 hypothetical protein CCR75_004769 [Bremia lactucae] diamond 387 60.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
28345289 28345289 PRJNA681822_P_NODE_466106_length_242_cov_2.650888_g464616_i0 PRJNA681822 466106 242 2.650888 6.41514896 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 52.8 1.05e-5   NR OQS03114.1 74557 g464616 i0 46.3 0.508264462809917 41 22 50.8 0 124 2 31 71 OQS03114.1 hypothetical protein THRCLA_04576 [Thraustotheca clavata] diamond 123 52.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28408508 28408508 PRJNA681822_P_NODE_476086_length_241_cov_1.833333_g474596_i0 PRJNA681822 476086 241 1.833333 4.41833253 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 60.5 2.04e-8   NR KAI9914348.1 230839 g474596 i0 47.7 1.64315352697095 44 23 54.8 0 240 109 284 327 KAI9914348.1 hypothetical protein PsorP6_008154 [Peronosclerospora sorghi] diamond 396 60.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
28641382 28641382 PRJNA681822_P_NODE_307287_length_272_cov_1.547739_g305798_i0 PRJNA681822 307287 272 1.547739 4.20985008 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 77 6.37e-15   NR TMW62795.1 41045 g305798 i0 70 4.57720588235294 50 14 54 1 13 159 116 165 TMW62795.1 hypothetical protein Poli38472_005413 [Pythium oligandrum] diamond 1245 77 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29040164 29040164 PRJNA681822_P_NODE_419828_length_247_cov_1.735632_g418339_i0 PRJNA681822 419828 247 1.735632 4.28701104 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 129 1.85e-32   NR XP_012202364.1 695850 g418339 i0 69.1 0.983805668016194 81 25 98.4 0 3 245 284 364 XP_012202364.1 hypothetical protein SPRG_07696 [Saprolegnia parasitica CBS 223.65] diamond 243 129 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
29714357 29714357 PRJNA681822_P_NODE_476650_length_241_cov_1.803571_g475160_i0 PRJNA681822 476650 241 1.803571 4.34660611 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 50.4 6.84e-5   NR DBA04713.1 4803 g475160 i0 36 6.77178423236515 75 42 85.9 2 239 33 67 141 DBA04713.1 TPA: hypothetical protein N0F65_012296 [Lagenidium giganteum] diamond 1632 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30113493 30113493 PRJNA681822_P_NODE_120272_length_368_cov_1.044068_g118785_i0 PRJNA681822 120272 368 1.044068 3.84217024 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 71.6 1.91e-12   NR CCA14227.1 890382 g118785 i0 45.3 0.77445652173913 95 49 75 1 1 276 110 204 CCA14227.1 60S ribosomal protein L13 putative [Albugo laibachii Nc14] diamond 285 71.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
30410073 30410073 PRJNA681822_P_NODE_377573_length_252_cov_1.720670_g376084_i0 PRJNA681822 377573 252 1.72067 4.3360884 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 59.7 9.33e-9   NR XP_067783345.1 4785 g376084 i0 39.3 8.04761904761905 84 40 97.6 3 247 2 58 132 XP_067783345.1 RxLR-like protein [Phytophthora cinnamomi] diamond 2028 59.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30429949 30429949 PRJNA681822_P_NODE_453293_length_244_cov_0.900585_g451803_i0 PRJNA681822 453293 244 0.900585 2.1974274 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0205   NR GLD95238.1 114742 g451803 i0 40 1.35245901639344 75 38 91 2 19 240 393 461 GLD95238.1 hypothetical protein PINS_up003882 [Pythium insidiosum] diamond 330 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30619071 30619071 PRJNA681822_P_NODE_406893_length_249_cov_0.875000_g405404_i0 PRJNA681822 406893 249 0.875 2.17875 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 50.4 7.61e-5   NR XP_012212834.1 695850 g405404 i0 38.4 1.75903614457831 73 45 88 0 3 221 548 620 XP_012212834.1 hypothetical protein SPRG_18016, partial [Saprolegnia parasitica CBS 223.65] diamond 438 50.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
30840295 30840295 PRJNA681822_P_NODE_225074_length_294_cov_1.045249_g223585_i0 PRJNA681822 225074 294 1.045249 3.07303206 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 104 8.79e-24   NR TMW69562.1 41045 g223585 i0 59.8 1.96938775510204 97 37 99 1 292 2 366 460 TMW69562.1 hypothetical protein Poli38472_001718 [Pythium oligandrum] diamond 579 104 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31093071 31093071 PRJNA681822_P_NODE_397815_length_250_cov_0.870056_g396326_i0 PRJNA681822 397815 250 0.870056 2.17514 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 138 8.58e-36   NR KAI9907834.1 230839 g396326 i0 83.1 0.996 83 14 99.6 0 249 1 107 189 KAI9907834.1 hypothetical protein PsorP6_003454 [Peronosclerospora sorghi] diamond 249 138 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
31124327 31124327 PRJNA681822_P_NODE_90415_length_406_cov_2.006006_g88933_i0 PRJNA681822 90415 406 2.006006 8.14438436 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 92 1.42e-19   NR OQR90586.1 1202772 g88933 i0 37.5 1.83990147783251 128 79 93.8 1 26 406 32 159 OQR90586.1 hypothetical protein ACHHYP_20214 [Achlya hypogyna] diamond 747 92 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
31282642 31282642 PRJNA681822_P_NODE_412955_length_248_cov_0.880000_g411466_i0 PRJNA681822 412955 248 0.88 2.1824 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 48.1 4.86e-4   NR KAF0689305.1 120398 g411466 i0 34.8 0.798387096774194 66 42 79.8 1 236 39 389 453 KAF0689305.1 hypothetical protein As57867_019158 [Aphanomyces stellatus] diamond 198 48.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
31705630 31705630 PRJNA681822_P_NODE_361017_length_257_cov_1.673913_g359528_i0 PRJNA681822 361017 257 1.673913 4.30195641 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 85.9 7.92e-19   NR KAH9102501.1 100861 g359528 i0 52.8 1.68093385214008 72 34 84 0 1 216 87 158 KAH9102501.1 hypothetical protein AeMF1_020954 [Aphanomyces euteiches] diamond 432 85.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31946800 31946800 PRJNA681822_P_NODE_407677_length_249_cov_0.875000_g406188_i0 PRJNA681822 407677 249 0.875 2.17875 Peronospora destructor 86335 SAR_Eukaryotes SAR_Eukaryotes 53.1 1.07e-6   NR CAI5730667.1 86335 g406188 i0 49.2 0.734939759036145 61 31 73.5 0 247 65 20 80 CAI5730667.1 unnamed protein product [Peronospora destructor] diamond 183 53.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora destructor
32485022 32485022 PRJNA681822_P_NODE_332259_length_265_cov_2.046875_g330770_i0 PRJNA681822 332259 265 2.046875 5.42421875 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 48.5 4.03e-4   NR KAJ0390269.1 114742 g330770 i0 51.1 0.509433962264151 45 20 50.9 1 104 238 226 268 KAJ0390269.1 hypothetical protein P43SY_011242 [Pythium insidiosum] diamond 135 48.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32642429 32642429 PRJNA681822_P_NODE_390360_length_250_cov_1.740113_g388871_i0 PRJNA681822 390360 250 1.740113 4.3502825 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 140 1.27e-36   NR KAJ0404540.1 114742 g388871 i0 81.3 2.856 80 15 96 0 3 242 236 315 KAJ0404540.1 hypothetical protein P43SY_001640 [Pythium insidiosum] diamond 714 140 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;