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contig_metadata

6 rows where bioproject = "PRJNA681822" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681822 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7032253 7032253 PRJNA681822_P_NODE_264166_length_283_cov_1.428571_g262677_i0 PRJNA681822 264166 283 1.428571 4.04285593 Ignavibacterium sp. 2651167 Bacteria Bacteria 52.8 0.026   NTclustered gi|2314740639|dbj|AP026678.1| 2651167 g262677 i0 100 0.0989399293286219 28 0 10 0 112 139 1423401 1423374 MAG: Ignavibacterium sp. KatS3mg037 DNA, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
22329843 22329843 PRJNA681822_P_NODE_173838_length_324_cov_2.577689_g172350_i0 PRJNA681822 173838 324 2.577689 8.35171236 Pseudomonadati 3379134 Bacteria Bacteria 167 2.46e-45   NR RJP71478.1 2049428 g172350 i0 76.6 19.7685185185185 107 25 99.1 0 324 4 14 120 RJP71478.1 MAG: efflux RND transporter permease subunit [Ignavibacteriales bacterium] diamond 6405 168 0.994047619047619 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
26650407 26650407 PRJNA681822_P_NODE_474661_length_242_cov_0.911243_g473171_i0 PRJNA681822 474661 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 56.2 6.68e-7   NR MBD1207014.1 2053306 g473171 i0 43.8 4.58677685950413 73 37 90.5 2 229 11 816 884 MBD1207014.1 IPT/TIG domain-containing protein [Ignavibacteria bacterium] diamond 1110 56.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29430318 29430318 PRJNA681822_P_NODE_422249_length_247_cov_0.885057_g420760_i0 PRJNA681822 422249 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 110 1.4500000000000002e-26   NR MBK7378578.1 2049428 g420760 i0 60.5 2.95141700404858 81 32 98.4 0 245 3 217 297 MBK7378578.1 CHASE2 domain-containing protein [Ignavibacteriales bacterium] diamond 729 111 0.990990990990991 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
31377725 31377725 PRJNA681822_P_NODE_176856_length_322_cov_2.361446_g175368_i0 PRJNA681822 176856 322 2.361446 7.60385612 Ignavibacteria bacterium 2053306 Bacteria Bacteria 122 2.87e-32   NR HEY3249932.1 2053306 g175368 i0 54.7 0.987577639751553 106 45 98.8 1 320 3 7 109 HEY3249932.1 DJ-1/PfpI family protein [Ignavibacteria bacterium] diamond 318 122 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31440770 31440770 PRJNA681822_P_NODE_168856_length_328_cov_1.207843_g167368_i0 PRJNA681822 168856 328 1.207843 3.96172504 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 112 1.91e-26   NR TSA26300.1 2049428 g167368 i0 45 0.996951219512195 109 59 99.7 1 328 2 187 294 TSA26300.1 MAG: glycosyltransferase family 39 protein [Ignavibacteriales bacterium] diamond 327 112 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;