RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA681822", tax_phylum = "Candidatus Iainarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Candidatus Iainarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA681822 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30081842 30081842 PRJNA681822_P_NODE_393412_length_250_cov_0.870056_g391923_i0 PRJNA681822 393412 250 0.870056 2.17514 Candidatus Diapherotrites archaeon CG 1974404 Archaea Archaea 53.5 5.99e-7   NR PIU21387.1 1974404 g391923 i0 36.3 3.768 80 50 96 1 6 245 10 88 PIU21387.1 MAG: hypothetical protein COT15_02630 [Candidatus Diapherotrites archaeon CG08_land_8_20_14_0_20_34_12] diamond 942 53.5 1 Archaea   Nanobdellati Candidatus Iainarchaeota         Candidatus Diapherotrites archaeon CG08_land_8_20_14_0_20_34_12

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;