RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA681822", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 8 ✖

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA681822 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4484217 4484217 PRJNA681822_P_NODE_47684_length_540_cov_1.426124_g46228_i0 PRJNA681822 47684 540 1.426124 7.7010696 Alphanodavirus flockense 3426214 Viruses Viruses 981 0   NTclustered gi|22711883|ref|NC_004144.1| 12287 g46228 i0 99.444 8.68518518518519 540 3 100 0 1 540 1144 605 Flock house virus, complete genome blastn 4690 981 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
7033217 7033217 PRJNA681822_P_NODE_34686_length_638_cov_1.525664_g33277_i0 PRJNA681822 34686 638 1.525664 9.73373632 Alphanodavirus flockense 3426214 Viruses Viruses 1173 0   NTclustered gi|22711883|ref|NC_004144.1| 12287 g33277 i0 99.843 10.730407523511 638 1 100 0 1 638 640 3 Flock house virus, complete genome blastn 6846 1173 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
11373870 11373870 PRJNA681822_P_NODE_24269_length_771_cov_0.426934_g22978_i0 PRJNA681822 24269 771 0.426934 3.29166114 root 1 Root_unresolved Root_unresolved 1402 0   NTclustered gi|22681055|ref|NC_004146.1| 12287 g22978 i0 100 37.1712062256809 759 0 98 0 1 759 760 2 Flock house virus RNA 1, complete sequence blastn 28659 1402 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
12135228 12135228 PRJNA681822_P_NODE_443090_length_245_cov_0.895349_g441601_i0 PRJNA681822 443090 245 0.895349 2.19360505 Sedum sarmentosum crinivirus 2709776 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2320141943|gb|OM514357.1| 2709776 g441601 i0 100 2 245 0 100 0 1 245 4309 4553 MAG: Sedum sarmentosum crinivirus isolate KXLZCFY21 genomic sequence blastn 490 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Sedum sarmentosum crinivirus
13924745 13924745 PRJNA681822_P_NODE_3911_length_1872_cov_1.191773_g3363_i0 PRJNA681822 3911 1872 1.191773 22.30999056 root 1 Root_unresolved Root_unresolved 3446 0   NTclustered gi|22681055|ref|NC_004146.1| 12287 g3363 i0 99.893 42.9962606837607 1872 2 100 0 1 1872 2585 714 Flock house virus RNA 1, complete sequence blastn 80489 3458 0.99652978600347 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
17231620 17231620 PRJNA681822_P_NODE_257774_length_285_cov_0.433962_g256285_i0 PRJNA681822 257774 285 0.433962 1.2367917 Alphanodavirus flockense 3426214 Viruses Viruses 527 3.59e-145   NTclustered gi|22711883|ref|NC_004144.1| 12287 g256285 i0 100 3.81052631578947 285 0 100 0 1 285 1116 1400 Flock house virus, complete genome blastn 1086 527 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
19021695 19021695 PRJNA681822_P_NODE_144335_length_346_cov_1.186813_g142847_i0 PRJNA681822 144335 346 1.186813 4.10637298 Alphanodavirus 143920 Viruses Viruses 640 5.4999999999999996e-179   NTclustered gi|60679|emb|X02396.1| 12285 g142847 i0 100 35.5433526011561 346 0 100 0 1 346 2988 2643 Black beetle virus (BBV) RNA1 and RNA3 for protein A and B blastn 12298 640 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus heteronychi
24880229 24880229 PRJNA681822_P_NODE_301300_length_274_cov_1.149254_g299811_i0 PRJNA681822 301300 274 1.149254 3.14895596 Sedum sarmentosum crinivirus 2709776 Viruses Viruses 507 4.47e-139   NTclustered gi|2284931696|gb|OM514356.1| 2709776 g299811 i0 100 3 274 0 100 0 1 274 7890 8163 MAG: Sedum sarmentosum crinivirus isolate KXLZCFY120 methyltransferase, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 822 507 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Sedum sarmentosum crinivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;