RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA681822", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 12 ✖

tax_kingdom 1

  • Metazoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA681822 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14682686 14682686 PRJNA681822_P_NODE_258112_length_284_cov_2.189573_g256623_i0 PRJNA681822 258112 284 2.189573 6.21838732 Metazoa 33208 Porifera other_Eukaryota 130 2.81e-36   NR XP_064384635.1 6063 g256623 i0 73.5 74.6408450704225 83 22 87.7 0 35 283 1 83 XP_064384635.1 large ribosomal subunit protein uL11-like [Halichondria panicea] diamond 21198 131 0.99236641221374 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
14683003 14683003 PRJNA681822_P_NODE_285752_length_278_cov_1.126829_g284263_i0 PRJNA681822 285752 278 1.126829 3.13258462 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 166 1.2299999999999999e-47   NR XP_064402536.1 6063 g284263 i0 84.8 154.877697841727 92 14 99.3 0 2 277 298 389 XP_064402536.1 eukaryotic initiation factor 4A-III [Halichondria panicea] diamond 43056 166 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
19022016 19022016 PRJNA681822_P_NODE_227835_length_292_cov_2.050228_g226346_i0 PRJNA681822 227835 292 2.050228 5.98666576 Poecilosclerida 27925 Porifera other_Eukaryota 222 1.95e-53   NTclustered gi|321266699|gb|HQ379294.1| 942674 g226346 i0 89.714 61.25 175 17 60 1 117 290 148 322 Amphilectus fucorum voucher BELUM:Mc5093 28S ribosomal RNA gene, partial sequence blastn 17885 222 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Esperiopsidae Amphilectus Amphilectus fucorum
26809031 26809031 PRJNA681822_P_NODE_277801_length_280_cov_1.115942_g276312_i0 PRJNA681822 277801 280 1.115942 3.1246376 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 1.57e-4   NR KAI6656386.1 111878 g276312 i0 34 3.48214285714286 103 49 95.4 4 273 7 476 573 KAI6656386.1 Sequestosome-1 [Oopsacas minuta] diamond 975 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
27398228 27398228 PRJNA681822_P_NODE_369683_length_255_cov_0.923077_g368194_i0 PRJNA681822 369683 255 0.923077 2.35384635 Halichondria panicea 6063 Porifera other_Eukaryota 54.3 3.76e-6   NR XP_064388227.1 6063 g368194 i0 36.8 1.02352941176471 87 49 95.3 1 249 7 128 214 XP_064388227.1 sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Halichondria panicea] diamond 261 54.3 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
29020372 29020372 PRJNA681822_P_NODE_288248_length_277_cov_1.509804_g286759_i0 PRJNA681822 288248 277 1.509804 4.18215708 Metazoa 33208 Porifera other_Eukaryota 118 1.7299999999999999e-28   NR XP_064389351.1 6063 g286759 i0 58.7 13.2129963898917 92 38 99.6 0 1 276 609 700 XP_064389351.1 advillin-like [Halichondria panicea] diamond 3660 119 0.991596638655462 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
29197983 29197983 PRJNA681822_P_NODE_465029_length_243_cov_0.905882_g463539_i0 PRJNA681822 465029 243 0.905882 2.20129326 Oscarella lobularis 121494 Porifera other_Eukaryota 82 3.1e-16   NR XP_065828433.1 121494 g463539 i0 46.9 1 81 42 100 1 1 243 157 236 XP_065828433.1 poly(3-hydroxybutyrate) depolymerase-like [Oscarella lobularis] diamond 243 82 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
30662460 30662460 PRJNA681822_P_NODE_494113_length_217_cov_4.125000_g492623_i0 PRJNA681822 494113 217 4.125 8.95125 Metazoa 33208 Porifera other_Eukaryota 118 1.75e-29   NR XP_064406275.1 6063 g492623 i0 83.1 82.3963133640553 71 12 98.2 0 215 3 46 116 XP_064406275.1 probable ATP-dependent RNA helicase DDX47 [Halichondria panicea] diamond 17880 118 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
31030100 31030100 PRJNA681822_P_NODE_242655_length_288_cov_1.432558_g241166_i0 PRJNA681822 242655 288 1.432558 4.12576704 Oopsacas minuta 111878 Porifera other_Eukaryota 46.2 0.00377   NR KAI6661792.1 111878 g241166 i0 36.8 2.03125 57 36 59.4 0 117 287 177 233 KAI6661792.1 solute carrier organic anion transporter family member 4A1 [Oopsacas minuta] diamond 585 46.2 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
31136085 31136085 PRJNA681822_P_NODE_444075_length_245_cov_0.895349_g442586_i0 PRJNA681822 444075 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.8 5.85e-11   NR XP_064387395.1 6063 g442586 i0 45 7.97142857142857 80 40 93.1 2 229 2 1103 1182 XP_064387395.1 uncharacterized protein LOC135335773 isoform X3 [Halichondria panicea] diamond 1953 68.2 0.994134897360704 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
31705622 31705622 PRJNA681822_P_NODE_188637_length_315_cov_1.247934_g187149_i0 PRJNA681822 188637 315 1.247934 3.9309921 Homosclerophorida 81000 Porifera other_Eukaryota 86.3 3.79e-18   NR XP_062519832.1 121492 g187149 i0 47.4 5.41904761904762 78 41 74.3 0 308 75 5 82 XP_062519832.1 LIM and SH3 domain protein 1-like [Corticium candelabrum] diamond 1707 86.3 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
32485036 32485036 PRJNA681822_P_NODE_400399_length_249_cov_1.744318_g398910_i0 PRJNA681822 400399 249 1.744318 4.34335182 Halichondria panicea 6063 Porifera other_Eukaryota 52.4 1.59e-5   NR XP_064388228.1 6063 g398910 i0 43.4 0.63855421686747 53 17 63.9 1 230 72 31 70 XP_064388228.1 sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Halichondria panicea] diamond 159 52.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;